| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2429 |
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| Symbol | |
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| ID | 4174178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2955705 |
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| End bp | 2957000 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055440 |
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| Product | guanine deaminase |
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| Protein accession | YP_661999 |
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| Protein GI | 109898744 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | [TIGR02967] guanine deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAC ATCTATACCT TGCCTCTATT TTACATTTTC CACAGAAGAC GGCGCAGCCG
AAAGTAGACT TCAGCTATAT CAAGGACGGC GCTTTGGTCA CTCAAAATGG CAAGATCCTA
GCCACAGGCC AGGCTAATGA TCTTTTGAGC CAGTACCCTG AAGCGGTTTC TCACGATTAT
CGTGACCAGA TCATCATGCC GGGATTTATC GACAGCCATT TGCATTTCCC GCAGACAGAA
ATGTTGGCGA GTTTCGGTGA GCAGTTGCTC GATTGGCTGG ATAATTACAC CTTCCCCACT
GAGAAGAAAT TTGCCAACCC AGAGTATGCA GCCAAAATAG CAGATATATT TTTACGCCAG
CTTTATCGCA ACGGTACCAC CAGCGCCATG GTCTACTCTT CGGTGCATCA ATGTGCTGCA
GATGCACTTT TTAAAGCGGC TAAGCAACAC AAAATGTTAA TGATCGCGGG TAAGGTATGC
ATGGACAGGC ACTGCCCATC ATGGCTACAA GACACGCCAG AAACCGCCCA AAAAGAAAGC
GCTGAATTAA TTGAGCGTTG GCACGGCAAA GACCGCTTAT ATTATGCGAT CACCCCGCGT
TTCGCGCCCA CCAGTAGCCA TGAACAACTG CATGCATTGG GCGAGTTGGC ACAGCAATAT
CCAGATGTGT ACATTCAAAG CCATTTGAAC GAAAACCTGA ATGAGATCGA CTGGGTTAAT
TCACTCTTTC CTAACTATAA CGGCTATTTA GACGTATATG ACAAGTTCAA TATGCTGCGC
CCTAAAGCTA TGTTTGGTCA CTGTATTCAC ATGCAAGAGC ATGAATGGCA ACGCATGAGC
GATAGTGGCG CCAGTATTGC TTTTTGCCCT ACATCGAACT TGTTTTTAGG CAGTGGTTTG
TTCGATTTAA AAACGGCGGA AAAATACGAT ATCCCAGTGG CCCTCGCCAC GGATGTTGGT
GCAGGAACCA CTTTTAGTAT GCTGCGTACG TTGGGCGAAG CCTATAAAGT AGGGCAATTA
CGCTCCGAGC AGTTACCACC ATTACATGGG CTGTATCTGA TGACCCAGGG CGCCGCTGTT
GCACAAGGTT TAGAGCAAAG TATTGGCAAC CTAAATGCTG GGACGGATGC AGATTTCGTC
ATAGTTGACC CGCATTTTGA CGAGCTCACC AGTTTGCGCT GTGAACAACA AAACGAGATC
CAAGACATTA TATTTGCATT GAGTATGCTT GCTGATGACA GAGCCATCAC GGCCACTTAT
ATCGCCGGCG AGCCGGTTTA CCGAGCAAAC ACATAA
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| Protein sequence | MTTHLYLASI LHFPQKTAQP KVDFSYIKDG ALVTQNGKIL ATGQANDLLS QYPEAVSHDY
RDQIIMPGFI DSHLHFPQTE MLASFGEQLL DWLDNYTFPT EKKFANPEYA AKIADIFLRQ
LYRNGTTSAM VYSSVHQCAA DALFKAAKQH KMLMIAGKVC MDRHCPSWLQ DTPETAQKES
AELIERWHGK DRLYYAITPR FAPTSSHEQL HALGELAQQY PDVYIQSHLN ENLNEIDWVN
SLFPNYNGYL DVYDKFNMLR PKAMFGHCIH MQEHEWQRMS DSGASIAFCP TSNLFLGSGL
FDLKTAEKYD IPVALATDVG AGTTFSMLRT LGEAYKVGQL RSEQLPPLHG LYLMTQGAAV
AQGLEQSIGN LNAGTDADFV IVDPHFDELT SLRCEQQNEI QDIIFALSML ADDRAITATY
IAGEPVYRAN T
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