| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2425 |
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| Symbol | |
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| ID | 4174174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2951572 |
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| End bp | 2953926 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055436 |
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| Product | xanthine dehydrogenase |
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| Protein accession | YP_661995 |
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| Protein GI | 109898740 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG4631] Xanthine dehydrogenase, molybdopterin-binding subunit B |
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| TIGRFAM ID | [TIGR02965] xanthine dehydrogenase, molybdopterin binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTAAAC TTATTGAACA GCCGTTTACC AGTAACCCCC AAGGGAAAGT AGGCAAGTCT
CATCCCCACG AAAGTGCCAT TCGCCAAGTC AGCGGCCAAG CCCGTTATGT GGATGACATG
CCCCAGCCTG CGAATTTGCA GTACGCGGCC GTGGGCACCA GCCCTGAAGC CTCAGGTGCA
TTAAATTCTA TCGATTTGAC AGCGGTTTGG GCAAGCCCAG GCGTAACTGA TGTGATTACT
GTGGATGATG TACCAGGTCA TGTAGATATC GCCCCAGTAT TTGATGGCGA CCCTATTTTT
GCCCAAGGTA ACGTATTATT TAACGGTCAG GCCTTATTCG CGGTATTAGC CGACAGCGTG
CAACATGCGC GTCAAGCCGC TCTGAAAGCC AAGGTTGATA TTACGCCATT AGCTCCTTGC
CTAACGGTTG AAGCTGCGAA ACAACAGAGT AATTTTGTGC GCCCAGCGCA TTTTATGCAA
CAAGGTGATT TTGACACCGC CATTGGCCAA AGCGAACTAA ACGCGCAAGG ACATATAAGC
ATAGGCGGCC AAGAGCACAT GTATCTTGAA GGCCAAGTGT CTATGGCGAT AAACGATGAG
GAAGACCGCG TACTGGTTTA CACATCGAGC CAGCACCCCA GTGAAGTTCA AAAACTCATC
GCAGAGGTAT TAGGCTGTAA ATTGCACAAG GTCGTGGTGG ATATGCGTCG CATGGGCGGT
GGTTTTGGCG GTAAAGAAAC CCAAGCAGCA CAATGGGCGT GTATAGCTGC CTTGCTTGCC
AAACGTAACC TGTGCGCTGT AAAACTTCGC TTACCGCGCA TGCAAGATAT GATTGCCACG
GGTAAACGTC ATCCATTTGA AAACAGCTAT CAAGTGGGAT TTAACTCAGA AGGCTTAATT
AACGCGGCTG ATATAGATAT AAACGGTAAC TGCGGGCACT CACCTGACTT ATCAGATGCC
ATTGTCGACA GGGCGATGTT CCATTGCGAT AACGGTTATT ATCTTGAAAA CGTCAATGTG
GCGGGTCATC GCTGCCGTAC GAATCAGGTG TCACACACAG CCTATCGCGG TTTTGGTGGC
CCACAAGGTA TGATAGTTGC TGAAGCCATG ATGGACGCTG TTGCTCGAAA AGTAGGAAAA
GATCCGCTAA CGGTACGTAA GTTAAACCTA TATGGCGACA AAGATCGAAA TCTCACACCT
TATGGTATGA CGGTTGAACA CAACCTGTTG GGCGATTTGA TTGCACGATT AGAAACCTCT
TCTGACTATT GGGCCCGCAG AGAGGCCATC ACTCAGTTTA ATAAAAGCAG TCCCATTGTT
AAAAAAGGCC TGGCGCTGAC GCCCGTAAAA TTTGGCATCT CCTTTACTGC TAAGCATTTG
AATCAAGCTG GGGCACTGCT GCATGTATAT ACGGACGGCA GCATGCAGAT TAATCACGGT
GGCACAGAAA TGGGTCAAGG CTTACATACT AAAATTGGTC AGATTGTAGC CAATGAGTTT
GGCATTTCTT TGCATGATGT AGAAGTCACC GCTACGCGTA CTGATAAAGT GCCGAACACC
TCGCCCACGG CAGCATCAAG TGGCACCGAT CTTAACGGAA AAGCAGCACA AAATGCGTGT
ATCAGCGTCA AACAGCGCTT AGCAGAATTC TATGCAAAAA CCATCGACGA TTCGGAACTT
ACCGCGGATA AAGTGACTTT CGCCGACAAT CGCGTCACGT TAGGCCAACA TAACGTGGAG
TTCGTGCAAC TAGTACAAGA TGCCTACATT GGCCGCGTAT CGTTATCATC AACGGGCTTC
TATAAAACCC CTAAAATCCA TTATGACCGC AGCACAGGTA ATGGCCGCCC ATTCTTTTAC
TTTGCTTATG GTGCGTCGGT TTCCGAAGTC TCCATCGACA CCTTAACGGG CGAGTACAAA
GTAGAGCGTG TCGATATTCT GCATGATGTG GGCCGCAGCT TAAACCCAGC CATTGATATA
GGGCAGATAG AGGGTGGCTT TATACAAGGC ATGGGCTGGC TCACTACCGA AGACTTAAAG
TGGGATGATA AAGGTCGCTT GATCAGCAAC AACCCGGCGA CCTACAAGAT ACCTGCCATT
GGCGACACCC CCGACGTGTT TAATGTGGAC CTGTATCCAA GGGACAATGA CGAAGACAGT
ATTTATCACT CTAAAGCGGT GGGTGAACCG CCCTTTATGT TGGCTAATTC AGTTTGGTGT
GCCATTAAAG ATGCGATTTC AAGCTTAACA GACTACAAAA TTGATCCCCA GTTACCCGCC
CCTGCCACGC CAGAAGCCGT GCTGAAATGT ATTATGTCTA TAGATGCTGA CCCCACGTCT
AGCGAGCCTA GTTAA
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| Protein sequence | MRKLIEQPFT SNPQGKVGKS HPHESAIRQV SGQARYVDDM PQPANLQYAA VGTSPEASGA
LNSIDLTAVW ASPGVTDVIT VDDVPGHVDI APVFDGDPIF AQGNVLFNGQ ALFAVLADSV
QHARQAALKA KVDITPLAPC LTVEAAKQQS NFVRPAHFMQ QGDFDTAIGQ SELNAQGHIS
IGGQEHMYLE GQVSMAINDE EDRVLVYTSS QHPSEVQKLI AEVLGCKLHK VVVDMRRMGG
GFGGKETQAA QWACIAALLA KRNLCAVKLR LPRMQDMIAT GKRHPFENSY QVGFNSEGLI
NAADIDINGN CGHSPDLSDA IVDRAMFHCD NGYYLENVNV AGHRCRTNQV SHTAYRGFGG
PQGMIVAEAM MDAVARKVGK DPLTVRKLNL YGDKDRNLTP YGMTVEHNLL GDLIARLETS
SDYWARREAI TQFNKSSPIV KKGLALTPVK FGISFTAKHL NQAGALLHVY TDGSMQINHG
GTEMGQGLHT KIGQIVANEF GISLHDVEVT ATRTDKVPNT SPTAASSGTD LNGKAAQNAC
ISVKQRLAEF YAKTIDDSEL TADKVTFADN RVTLGQHNVE FVQLVQDAYI GRVSLSSTGF
YKTPKIHYDR STGNGRPFFY FAYGASVSEV SIDTLTGEYK VERVDILHDV GRSLNPAIDI
GQIEGGFIQG MGWLTTEDLK WDDKGRLISN NPATYKIPAI GDTPDVFNVD LYPRDNDEDS
IYHSKAVGEP PFMLANSVWC AIKDAISSLT DYKIDPQLPA PATPEAVLKC IMSIDADPTS
SEPS
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