| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2406 |
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| Symbol | |
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| ID | 4174154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2929306 |
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| End bp | 2930049 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638055417 |
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| Product | ABC transporter related |
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| Protein accession | YP_661976 |
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| Protein GI | 109898721 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGACCA TGACTGACAT CAAGAAAATT TATCGTACCG ACTCAATTGA AACCCACGCG
CTACGTGATT TCAACTTACA AGTAAATGAA GGTGACTTCG TTGCGGTGAC CGGCCCTTCA
GGCTCGGGTA AAACCACCTT TTTGAATATC GCCGGGCTGC TTGAGACGTT CGAAGAGGGC
CGCTTTGAAC TTGATGGCGT TGATATCAGT CACCAAAACG ATGCCGCTCG CAGTCGCCTG
CGCAATCAAA AGATTGGTTT TATTTTTCAA AGTTTTAACC TTATCCCCGA CCTGAACTTA
TTTGATAACG TTGATGTGCC CCTGCGCTAT CGTGGGTTTA ATCGCCAAGA GCGAAAAAAA
CGTATCGAAA ATAGCCTTGA GATGGTCGGC TTAGCCAAGC GCATGAAACA CCTTCCAGCT
CAACTATCAG GTGGACAACA ACAACGCGTT GCCATTGCGC GAGCGCTGGC CGGCGAGCCA
CGATTTTTAC TCGCTGATGA ACCCACAGGG AATCTTGATA GCAATATGGC CCAGAGCGTT
ATGTCATTAC TCAAAGACAT CAATGCCAAT GGAACCACCA TCATTATGGT CACCCATGAT
GCGGGTTTGG CAACGCAAGC AACGCGCAAT ATACATGTGC GTGACGGCAA GGTCAGTGAA
ATGAATGAGT CCATTGTCAC CAAAGTCGAT ATGCCAAATC CGGCGACCAC GGATAGCGGC
CCTGCTGTTG ATCTGGTTAA ATAA
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| Protein sequence | MLTMTDIKKI YRTDSIETHA LRDFNLQVNE GDFVAVTGPS GSGKTTFLNI AGLLETFEEG
RFELDGVDIS HQNDAARSRL RNQKIGFIFQ SFNLIPDLNL FDNVDVPLRY RGFNRQERKK
RIENSLEMVG LAKRMKHLPA QLSGGQQQRV AIARALAGEP RFLLADEPTG NLDSNMAQSV
MSLLKDINAN GTTIIMVTHD AGLATQATRN IHVRDGKVSE MNESIVTKVD MPNPATTDSG
PAVDLVK
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