| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2371 |
|---|
| Symbol | aat |
|---|
| ID | 4172528 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | + |
|---|
| Start bp | 2885498 |
|---|
| End bp | 2886202 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638055382 |
|---|
| Product | leucyl/phenylalanyl-tRNA--protein transferase |
|---|
| Protein accession | YP_661941 |
|---|
| Protein GI | 109898686 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2360] Leu/Phe-tRNA-protein transferase |
|---|
| TIGRFAM ID | [TIGR00667] leucyl/phenylalanyl-tRNA--protein transferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0183532 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGAAC TGTTTCAATT AGATAAATCC TTGCATTTCC CCCCGCCAGC TCACGCGTTA
ACTGATCCTC CCGGCCTGCT CGCTTTTGGC GGTGATTTGT CGGTAAACCG CTTATTACAT
GCTTATCAGC AAGGTATATT TCCTTGGTTC AGTGCCAATG AACCAATTTT ATGGTGGTCA
CCAGACCCGC GAGGCATTTT GCCTTTAGAT AATTTTAGCG TGTCGAAGAG CTTAAGGAAA
TTTATTCGAA AAACACCATT GCGCGTCACA GTCAATCGGC GCTTTGATGA AGTTATATAT
GCATGCGCCA AAGTAAAACG GCAATCTTCG GGAACTTGGA TCACGGATGA CATGATCAAT
GCCTACATAG AATTGCATCG CTGCGGTGGC GCGCACTCAA TTGAAGTATG GGATGATGAA
GAACTCGTTG GCGGCTTATA TGGTGTTACC CCCGGTAATG TATTTTGCGG TGAATCAATG
TTTCACTATG CGACGAATGC GTCCAAGCTT GCTATGTTTT ACTTAGTGGA ACTTTTACGC
CTAAACGGCT GTGAGTTTAT TGATTGTCAG TTACAGAATG ATCATTTGGC TAGCCTAGGA
TGCATCGAAA TGCCAAGGGC TGAGTTTTTG AACAGGCTCA AAGAAGCAGT GAAACACCCA
ATGGATCAAT CGTTGTGGCT TCCTAGAGAA TTAACGCAAC CATAA
|
|---|
| Protein sequence | MIELFQLDKS LHFPPPAHAL TDPPGLLAFG GDLSVNRLLH AYQQGIFPWF SANEPILWWS
PDPRGILPLD NFSVSKSLRK FIRKTPLRVT VNRRFDEVIY ACAKVKRQSS GTWITDDMIN
AYIELHRCGG AHSIEVWDDE ELVGGLYGVT PGNVFCGESM FHYATNASKL AMFYLVELLR
LNGCEFIDCQ LQNDHLASLG CIEMPRAEFL NRLKEAVKHP MDQSLWLPRE LTQP
|
|---|
| |