| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2370 |
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| Symbol | |
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| ID | 4172527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2884496 |
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| End bp | 2885446 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055381 |
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| Product | thioredoxin reductase |
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| Protein accession | YP_661940 |
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| Protein GI | 109898685 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0492] Thioredoxin reductase |
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| TIGRFAM ID | [TIGR01292] thioredoxin-disulfide reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.274866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGAAT CAAGACACGT AAAATTACTT ATTTTAGGCT CGGGTCCTGC GGGTTACTCG
GCTGCTGTTT ATGCGGCGCG CGCAAACTTA AACCCTGTAC TGTTAACTGG CATTCAGCAA
GGTGGGCAAT TAACCACGAC AACTGAAGTA GAGAACTGGC CCGGCGATGC TGAAGGGCTA
ACAGGTCCTG ATTTAATGGT TCGTATGCAG CAGCACGCTG AAAAATTCGA TACTGAAATC
ATTTTTGATC ACATCAATAA AACAGATCTG ACAAAACGCC CGTTCACCTT AGTGGGTGAT
GCAGGTACCT ACACTTGTGA TTCACTGATT ATTTGCACTG GGGCGTCCGC AAAATATTTA
GGAATGGAAT CAGAAACAGC ATTTATGGGT AAAGGTGTTT CGGCCTGTGC TACTTGTGAT
GGTTTCTTCT ATCGTAACCA AAAAGTTGCT GTGATTGGCG GCGGTAACAC AGCCGTTGAA
GAAGCACTTT ATTTATCTAA TATCGCATCA GAAGTGCATG TTATTCATAG ACGTGACACC
TTTAGAAGCG AAAAGATACT ATCTCAACGC TTATTAGATA AAGCAGAGAA CGGCAACGTA
ACCCTACACT TGAATAGCAC GCTTGATGAA GTGCTTGGCG ACCAAATGGG CGTCACGGGT
GTGCGCATCA AGTCGACCAC CTCTGATGAA AGTAAAGAGC TAGATGTAAT GGGGCTGTTT
GTTGCTATTG GTCATCAACC GAATACGGGG ATATTTGAAG GCCAATTGGA GATGAAAGAC
GGGTATATCA AAGTGAACAG TGGCACCGCC GGTAATGCAA CACAAACCAG TGTTGAGGGT
GTATTTGCTG CAGGTGATGT AAGTGACCAT GTATATCGCC AAGCCATTAC ATCAGCTGGC
ACAGGATGTA TGGCAGCACT AGATGCTGAG AAATTCTTAG ACGCCCTATA A
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| Protein sequence | MSESRHVKLL ILGSGPAGYS AAVYAARANL NPVLLTGIQQ GGQLTTTTEV ENWPGDAEGL
TGPDLMVRMQ QHAEKFDTEI IFDHINKTDL TKRPFTLVGD AGTYTCDSLI ICTGASAKYL
GMESETAFMG KGVSACATCD GFFYRNQKVA VIGGGNTAVE EALYLSNIAS EVHVIHRRDT
FRSEKILSQR LLDKAENGNV TLHLNSTLDE VLGDQMGVTG VRIKSTTSDE SKELDVMGLF
VAIGHQPNTG IFEGQLEMKD GYIKVNSGTA GNATQTSVEG VFAAGDVSDH VYRQAITSAG
TGCMAALDAE KFLDAL
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