Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2368 |
Symbol | |
ID | 4172525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2883264 |
End bp | 2883794 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055379 |
Product | protein of unknown function DUF335, SprT |
Protein accession | YP_661938 |
Protein GI | 109898683 |
COG category | [S] Function unknown |
COG ID | [COG3091] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0781299 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACACGG CTTCCATCCC CACTACCTCA CTTAATCAGA TAGACATGCA AAGCAATGTT GTAGAACGCG TGCGTATTTG CATGGAGCAA GCAAATACGC AACTGCAAAG CAACCTAGCT ATGCCTAAGA TACACTTTAA CCAAAGAGGT AGAATAGCCG GTTGTGCACG CTTGCAATCG AACGAGTTGC GTTTTAATCC GGTTCTTTTG ACAGACAATT ACACTACATT CATCAACGAG GTAGTGCCCC ATGAAGTCGC ACATTTAGTG GTATTTAACC TCTATGGGCG AGTGAAGCCA CACGGCAAAG AGTGGCGAGG GATAATGCAA CAAATATTTG GGTTAACAGG CCATACCTAC CATCAAATGG ATGTGACTAA AGTGAGCGGA AAGCGATTTC TCTATCGATG CGCATGTGGT GAAGTTCAGC TCAGCATAAG ACGGCACAAC AAAGTTAAAC GGCAGCAGCA ACAGTATATT TGCCGCCAGT GTCATAGCGT GTTGATTTGC GCAGAAACAA AAAACGATTA G
|
Protein sequence | MNTASIPTTS LNQIDMQSNV VERVRICMEQ ANTQLQSNLA MPKIHFNQRG RIAGCARLQS NELRFNPVLL TDNYTTFINE VVPHEVAHLV VFNLYGRVKP HGKEWRGIMQ QIFGLTGHTY HQMDVTKVSG KRFLYRCACG EVQLSIRRHN KVKRQQQQYI CRQCHSVLIC AETKND
|
| |