Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2367 |
Symbol | |
ID | 4172524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2881294 |
End bp | 2883156 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055378 |
Product | signal peptide peptidase SppA, 67K type |
Protein accession | YP_661937 |
Protein GI | 109898682 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
TIGRFAM ID | [TIGR00705] signal peptide peptidase SppA, 67K type [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAACCG ATAAAAGTTG GACCAAGGCG CTATTTGGCG GCATCTGGTT AGTACTCAAT TTTAGCCGTA AGTTATTCTT TAATCTTATC TTTCTCGTTA TTGCCATAGG CATAATCTCG TTATTTTTTA GGGACAACGG GCAAATAGGT GTGAAACAAG ATTCAGCACT AGTGCTGAAT ATCAAGGGTG ACATCGTTAT TCAGAAGCAC GCCATTGACC CTTTCGAAGC GTTTATGCAA GAAGCACTGG GTCAAGCAAA CGAAAAACCT GAGGTTTTGT TACAAGATAT ATTGCTCACC TTGGATAACG CTAAGCAAGA CAGACGAATT AAAGCACTCG TACTCGACTT GCACGAACTC AGCGGCGCAG GTCTTGACAA GCTTGAACAG GTTGCACAAG CAATAGACGA TTTTAAACTC AGTGAAAAAC CCGTTTACGC CATCGGTGAC TACTACACTC AAGAGCAATA TTACATTGCC AGTCATGCTG ACCACGTTTA CATGAACCCC ATGGGATGGA TGTTATTTGA AGGGTATGGT CGTTTCGGCA TGTATTACAA ATCAGCCCTA GAGAAAATCA AAGCAACCAC TCACGTATTC AAAGTCGGTA CTTACAAGTC AGCGGTTGAA CCCCTGCTTC GCGACGACAT GTCACAACCC GCTAAAGAAG CCAACAAGGC ATGGTTAAAC GGTATGTGGT CACAATACAA AAACAGCGTT GCTGAAGCCA GAGGGCTGTC TACCGATAAC TTCGACGAAA AAGTTGATGA GTTTATGGTT AAGTTTGAAG ACGCAAATGG CGATTTCGCC CAGTATGCCT TAGACAACGG CTGGGTAGAC GGTTTAAAAA CACGAGAACA AGTACTGCAA GAGCTTGTGT CGGTCGTGGG CAAAGATGAA GACGCCAAAC TCGGTTATAC CAATATCACC TTTAAACATT ACTTACACAT TGTTAACCCA CCCCTTCCCC ATTTAAATAC AGGTATTGAT AAAGTCGGCG TCGTGGTTGC CAAAGGAACG ATTTTAAACG GCGAGCAAAA ACCCGGTACC GTTGGGGGTG ATAGCACCGC AGAATTACTA CGCAAAGCGC GTTTAGACGA CAGTATAAAA TCGGTAGTTT TATATGTGGA TTCACCTGGG GGTAGCGCAT TTGCTTCTGA GATCATTCGA CAAGAAATTG AAAACCTCAA GGCAGCGGGT AAACCAGTAG TTGCACTCAT GAGTACCTAT GCTGCATCAG GTGGCTATTG GATTTCAGCC AGTGCCGATG AGATTTGGGC TGCACCGAGT ACGATAACCG GCTCAATCGG TATATTCGGT ATGTTCGTTA GTTTTGAAAA CACACTGGAT TACCTTGGAG TGCATACCGA TGGTGTGGGC ACAACTGACT TCGCAGGCAT GGGGATTACT CGCGGTATTG ACCCGAAAAT GGGTCAAGTA TTGCAGCGCA GTATTGAGCA TGGCTACGAT CAATTTATAT CTTTGGTGGC TGAGGAACGT CACATGAGCA AGGAATCGGT GGACAACATA GCGCAAGGTC GTGTGTGGAT TGGTGAGACC GCTTTGAAAT TAAACTTGGT CGACCACCTC GGCTATATTG ATGACGCAGT CTCTGCGGCG GCAGCCCGCG CTAATTTATC AGAGTATGAC GTCACCTATG TAGAGCGCTC TTTAAATAGC AGTGAGTTAT TTTGGAAAGA GTTATTCTCA AATGCCTCTG TTGTGTTAGC GAGGACCCAG TTTGCTCAAA GTGACAGTAA GCTAATGAGC CTGATCAACA AAGTAACAGC CGATTTCGAT AATGTAGCAA AACTTAATGA TCCTCGGGGC GTTTACGCTT TTTGCCTAAC CTGCGATATT TAG
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Protein sequence | MSTDKSWTKA LFGGIWLVLN FSRKLFFNLI FLVIAIGIIS LFFRDNGQIG VKQDSALVLN IKGDIVIQKH AIDPFEAFMQ EALGQANEKP EVLLQDILLT LDNAKQDRRI KALVLDLHEL SGAGLDKLEQ VAQAIDDFKL SEKPVYAIGD YYTQEQYYIA SHADHVYMNP MGWMLFEGYG RFGMYYKSAL EKIKATTHVF KVGTYKSAVE PLLRDDMSQP AKEANKAWLN GMWSQYKNSV AEARGLSTDN FDEKVDEFMV KFEDANGDFA QYALDNGWVD GLKTREQVLQ ELVSVVGKDE DAKLGYTNIT FKHYLHIVNP PLPHLNTGID KVGVVVAKGT ILNGEQKPGT VGGDSTAELL RKARLDDSIK SVVLYVDSPG GSAFASEIIR QEIENLKAAG KPVVALMSTY AASGGYWISA SADEIWAAPS TITGSIGIFG MFVSFENTLD YLGVHTDGVG TTDFAGMGIT RGIDPKMGQV LQRSIEHGYD QFISLVAEER HMSKESVDNI AQGRVWIGET ALKLNLVDHL GYIDDAVSAA AARANLSEYD VTYVERSLNS SELFWKELFS NASVVLARTQ FAQSDSKLMS LINKVTADFD NVAKLNDPRG VYAFCLTCDI
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