Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2364 |
Symbol | |
ID | 4172521 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2879404 |
End bp | 2880111 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055375 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_661934 |
Protein GI | 109898679 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.109784 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACAAA TCGTACTTGA TACAGAAACG ACCGGTATCG ATCCTAGGCA AGGTCATAGA ATCATTGAAA TAGGCTGTGT GGAGTTATTA AATCGCCGCT TAACAGGTAA CACGTTTCAT GTGTACGTTA ATCCCCAAAG ACTCATTGAA CAAGAAGCGA TAGAGGTTCA CGGTATTACT AACGAGTATC TGTTAGACAA ACCGCTTTTT GCAGATGTTG CTGCTGATTT TGTAAAGTTC ATCAGTGGCG CTCAGCTCGT TATTCATAAT GCGCCGTTTG ATGTGGGCTT TATGGATCAC GAGTTTGCTC GTGTTGCTGC GATGGCGGGC AAAAAAACCA GTGATATGTG TACCGTGTTA GATACACTCG AAATGGCGCG GCAAATTCAC CCGGGTCAGA AAAACAATCT AGATGCTTTG TGTAAACGCT ACGGTATAGA CAACTCCCAT CGAGAATTGC ACGGCGCATT ATTGGATTCC GAGATACTCG CTGACGTTTA TCTAATGATG ACTGGCGGGC AAACGGATCT TAATTTGTCT GGTAAGTCGA ACTCCGATGG CGGCAGTCAG GTTGAACGTA TTCGCAGGCT TGATCCTCAG TTAAATCAGT TAAAGGTTTT ACGCGCCACA GCCGATGAAT TAGTAGAGCA CGAGAAGCGT TTAGATCTGG TTAATAAAGA AGGCGGTTCT TGTTTGTGGC GTGAATAA
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Protein sequence | MRQIVLDTET TGIDPRQGHR IIEIGCVELL NRRLTGNTFH VYVNPQRLIE QEAIEVHGIT NEYLLDKPLF ADVAADFVKF ISGAQLVIHN APFDVGFMDH EFARVAAMAG KKTSDMCTVL DTLEMARQIH PGQKNNLDAL CKRYGIDNSH RELHGALLDS EILADVYLMM TGGQTDLNLS GKSNSDGGSQ VERIRRLDPQ LNQLKVLRAT ADELVEHEKR LDLVNKEGGS CLWRE
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