Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2320 |
Symbol | |
ID | 4172474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2824739 |
End bp | 2825614 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638055329 |
Product | putative cyclase |
Protein accession | YP_661891 |
Protein GI | 109898636 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000962152 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATTA ATGACATAAA ACGAGTACAC AGAATTCCAA AAGTTGACAT GGATAAAATG ATCGATGAAG AAAATAAAAG TAACGACACC GGGATGCAGT TTTACGACCT AAGCCATGAA TGGGGTTTGG GACAGCCTTG TTGGCCTTAC TTTGAAGATG TCAAAATCGA GCGTCTTCAT GGTCATTCTC GTTCAGGGGT TCTGACGCAA AAAATCACCA CAGTAATGCA TTCAGGTACC CACATTGACG CCCCAGCTCA CGTGGTTGAA GGCACCCCAT TTATGGATCA AATGCCACTG CCAAGATTCT TCGGTGCAGG TGTTGTGGTG TCTATTCCCA AGAAAAAGTG GGAAGTCATT ACAGCTGAAG ATCTTGAAAA CGTTCGTCCT AAAATACGCG AAGGCGATAT CGTTATTATC AATACAGGTT GGCACCATAC CTATGCTGAT TCTGCTGAGT ATTATCATTA TGGCCCAGGA CTGTACCGTG AAGCGGGCGA GTGGTTAGCA AAGAAGAAAG TCAAAATGGT CGGTATTGAT GTGCAAGCAC TTGATCATCC GCTGGGTACG GCTATCGGTC CACATGGCAC AGGACCTCTT ATTCCTCATC TTGAAGACGA GTACCGTGAA TTCACCGGCG GTCGTGGCAT TAAAGAAGAT TTTCCTGATT GGGAGCCGTG CCATAGAGCC CTGTTGAACA GTGGTATTTG CGGCATTGAG AATGTGGGTG GCGAACTAGA CAAAGTCACT GGCAAGCGCT GCACTATTGC TGCATTCCCA TGGCGCTGGA AAGGCGGCGA CGGTTGTATG GTGCGCCTCG TGGCGATGGT TGACCCTAAA GGTGAGTACC GTATCGAGCA AGGAGACACA GAGTAA
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Protein sequence | MKINDIKRVH RIPKVDMDKM IDEENKSNDT GMQFYDLSHE WGLGQPCWPY FEDVKIERLH GHSRSGVLTQ KITTVMHSGT HIDAPAHVVE GTPFMDQMPL PRFFGAGVVV SIPKKKWEVI TAEDLENVRP KIREGDIVII NTGWHHTYAD SAEYYHYGPG LYREAGEWLA KKKVKMVGID VQALDHPLGT AIGPHGTGPL IPHLEDEYRE FTGGRGIKED FPDWEPCHRA LLNSGICGIE NVGGELDKVT GKRCTIAAFP WRWKGGDGCM VRLVAMVDPK GEYRIEQGDT E
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