| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2312 |
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| Symbol | |
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| ID | 4172466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2814356 |
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| End bp | 2815264 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055321 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_661883 |
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| Protein GI | 109898628 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAAATC TGCATGATTT GAGAATATTT TGTGAAACCG CACAGCAAGG CAGCCTATCA
GCTTGCGCTA GGAAGATGGA TTTGTCTCCT GCTGTGGTTA GCGCTTCGTT GAAACGTTTG
GAAGCCGACC TGGGTGTTCT ATTATTTATT CGGTCTACTC GAAATCTGCG GTTAACCCAG
AAAGGCGAAC AATTTTTGCG CCATTGCATT GATGCACTCA GTATTTTAGA TGAAGCCACC
ACGCAAATGC ACAGCGAAGA TACAGAGTTA AGTGGGGTTA TTCAGCTTTC AGCCCCTTCA
GATTTGGGCC GAAATTTACT ACTGCCATGG CTTGATGAGT TCATGACGCT ACATCAAAAA
TTGGAAATAC GACTGCAGTT ATCAGACAGC CCCGCCGACT TATATAGTCA ACCAGTCGAT
TTAGCCTTGC GTTACGGCAA ACCAAAAGAC TCCGGCTTTA TTGCCATTCC GGTTGCTGCT
AACAATGTTC CGGTATTGTG CGCTTCACCC AGTTATATTG AACAATTTGG CTCGCCCAAC
ACGTTGCAAG AACTCACGCA ACACAATTGT TTATGTCACG GACATAATGA TACTTTGCAT
TCTCGCTGGG TATTCAATAA AGACAACAAA AACACCAGCA TTGATGTAAC CGGTAATCGG
CAGTGTAAAG ATGGCGACAT CACCCGTAAA TGGGCCATTG CTGGAAAAGG TATTGCTAGG
AAGTCTCAAT TGGATATCGT TCAAGACCTA ATACAAGGGC GATTGATTGA GCTTGATGTA
GATGGTTGGC AAGGAGAAAC ATTTCCTCTT AACCTAATTT GTGCTGAAAG GCGGTTACTC
AGCCCAACCG TGAACGCATT TAAGATCGAT CTACAGCAAA AGGTCGCTGC GCTGCTTACC
CAACTCTAA
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| Protein sequence | MKNLHDLRIF CETAQQGSLS ACARKMDLSP AVVSASLKRL EADLGVLLFI RSTRNLRLTQ
KGEQFLRHCI DALSILDEAT TQMHSEDTEL SGVIQLSAPS DLGRNLLLPW LDEFMTLHQK
LEIRLQLSDS PADLYSQPVD LALRYGKPKD SGFIAIPVAA NNVPVLCASP SYIEQFGSPN
TLQELTQHNC LCHGHNDTLH SRWVFNKDNK NTSIDVTGNR QCKDGDITRK WAIAGKGIAR
KSQLDIVQDL IQGRLIELDV DGWQGETFPL NLICAERRLL SPTVNAFKID LQQKVAALLT
QL
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