| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2302 |
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| Symbol | |
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| ID | 4172456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2802110 |
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| End bp | 2803462 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055311 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_661873 |
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| Protein GI | 109898618 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0020202 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAAT TTAGCACTTT GTTAGCATCT ACGTATCACA AGATAGGCTT CAAACGCTTG
TTCTGGCGCG TTTTTATTTG GTTTTGGTTA TCCAGCTTGT TGGTGATGTT TGCCACCAGC
TTTGTGATCA TCAGTAAATA CTCTTCAGAA GACTACACCA AACGCTACAG CAATGACGTG
CTCACCCAAG CGGAGCGGAT CGTATGGCGC TATGAGCAGA CGTTGATTCC ACATGCAAAC
CGGTCGATAA AATTAAAAAA TTGGATCAAT AAAAAAGAGA ACCGCCGGGG TCATCTGATG
TCGATGCTGA TAATGGATGA CACTAACCAG CGTATTTATC ATTACCGCTT TAACAAAGTA
AAACCTGAAG ACCGCCTCGA ATACTCGGTG TTAGGTCCCT CGGGGCGAAG CTACCTAGTT
TTCAGTAAAA AACCGCAAGC GCCTAGGATA TACACGCAAC TAATGTATCG GTTCCAATCG
CTGCAGTTCG TTTTCATTTT TTTTGCATCG GCATTGGTCA GTGCGTTACT CAGCTGGAGT
ATAACGCGAC CATTAAATTA TCTCGGTTCG TTTAGTCGTC ACTATGCCAA CAAGCAAGAA
GTTGCCCCAC TGCCGCGTGC ATTGCTTACC CGAGGCGATG AGGTGGCTGA TTTAGCCCAA
GACATCGAAT TTATGATCAA TAAAACTCAT GCCGCAGCCA CTGCTCAGCA ACAATTACTG
CATGATGTAT CCCATGAATT GCGTGCCCCA CTGGCCCGTT TGCAAGTATC GGCTGCACTT
ATCGAACAGA AAAGCCCAGA CAGTCGTCAC GTTAAACAAA TACACAATGA TTGTTTGCGC
ATTGATCAAC TTATTCAGCA GATCCTCGAT TACTCTAAAC TTGAACAGGG TAACCCAGCT
CAGGAGCCTT GTAGTATTAA CGCGTTGTGC GAGCAAGTGA TTAAAAACAT GGCCGTTACC
TATCCTAATA TTCCAGTCAC ATTCAAAGCG GATAACAAGG CACAGTTAAA TGGCTACCCA
GAAGCATTAT TGCAAGCATT CGACAACATC ATTGGTAATG CCTGTAAATA TTCATCTGAC
GGGCAATCAG TAGACATTAG CGTACACAAC AGAGAAAACA GTATCGTCGT CAGCGTACGG
GATCATGGCC CTGGCGTGGA TGAAAGTGAA ATGGCTAAAT TACTGCAACC CTTTTATCGC
GCTGGCAATA AAATGCACAC CAATGGGTTT GGTTTAGGGC TGAGTATCGC ACTTAAGGCC
ATCAACAAAC ATCAAGGCGA ACTTCGTATG TCAACACCCG ACGGTGGCGG ATTGCTTGTT
GAAATAATAC TGCCTCAAGA TACACTCGCT TAG
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| Protein sequence | MAKFSTLLAS TYHKIGFKRL FWRVFIWFWL SSLLVMFATS FVIISKYSSE DYTKRYSNDV
LTQAERIVWR YEQTLIPHAN RSIKLKNWIN KKENRRGHLM SMLIMDDTNQ RIYHYRFNKV
KPEDRLEYSV LGPSGRSYLV FSKKPQAPRI YTQLMYRFQS LQFVFIFFAS ALVSALLSWS
ITRPLNYLGS FSRHYANKQE VAPLPRALLT RGDEVADLAQ DIEFMINKTH AAATAQQQLL
HDVSHELRAP LARLQVSAAL IEQKSPDSRH VKQIHNDCLR IDQLIQQILD YSKLEQGNPA
QEPCSINALC EQVIKNMAVT YPNIPVTFKA DNKAQLNGYP EALLQAFDNI IGNACKYSSD
GQSVDISVHN RENSIVVSVR DHGPGVDESE MAKLLQPFYR AGNKMHTNGF GLGLSIALKA
INKHQGELRM STPDGGGLLV EIILPQDTLA
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