| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2301 |
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| Symbol | |
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| ID | 4172455 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2801373 |
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| End bp | 2802107 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055310 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_661872 |
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| Protein GI | 109898617 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00025805 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAATG AAAAGTACAA AATCCTATTA GTAGACGACG ATGAAACTCT TTGTTCTTTG
CTGAGCGAGT TTTTGCAAGA AGAAGGCTTT GAGGTTGAAA CGCTGCATTC AGGTAATGCC
GCCACAGAGC GCTTATTGCA AAGTGATGAA TTCGACACGG TAGTGCTCGA TATAATGATG
CCTGGCATGT CCGGACTTGA CGTATTACGT AGCGTGCGCG CTAAACGCCA AGTTCCTATA
TTAATGCTAA CGGGACGTGG CGACGACATT GACAGAATTG TGGGTCTTGA AATGGGCGCC
GATGACTATT TAGGTAAACC CTGTAACCCA AGAGAACTCA GTGCACGGAT TAAGGCCATC
ATTCGTCGCA CCGAAAACTC CCTTGGCAAC GGCGCAGCGG GCAAAACGAT TGTGCATGCT
CTGTTGCATG GCATAGAGCT CGATACTGGC ACACGTACCG CGGTTGTGAA TAACACCACC
CTGCCATTAA CCAGTGCGGA ATTTAATGCG TTAAGTTTAT TGATGGAGCG CGCTGGGCAA
ACCATTACCA AGCAAGACAT GACGCAAGAA GTGCTAAACC GCCCACTTGA AGCTTATGAT
CGCGCCATGG ACGTACACAT TAGCCGAATT CGACAAAAAC TATCCTCACA GGGGATAAAC
GATGTGATCA AGTCAATTCG CGGCGTCGGT TATCAGATGT TAACCGAGCA ACAGCCAACC
CAAAGTGACG ACTAA
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| Protein sequence | MKNEKYKILL VDDDETLCSL LSEFLQEEGF EVETLHSGNA ATERLLQSDE FDTVVLDIMM
PGMSGLDVLR SVRAKRQVPI LMLTGRGDDI DRIVGLEMGA DDYLGKPCNP RELSARIKAI
IRRTENSLGN GAAGKTIVHA LLHGIELDTG TRTAVVNNTT LPLTSAEFNA LSLLMERAGQ
TITKQDMTQE VLNRPLEAYD RAMDVHISRI RQKLSSQGIN DVIKSIRGVG YQMLTEQQPT
QSDD
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