| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2293 |
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| Symbol | |
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| ID | 4172447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2795386 |
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| End bp | 2795916 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055302 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_661864 |
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| Protein GI | 109898609 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4665] TRAP-type mannitol/chloroaromatic compound transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATACAG TCGTTAAGTT ACTAGGCAAA TTTATAGATG GCGTTGGCCA TTTATGCAGT
GTGCTGATGA TGTTAATGAT TTTGAACGTG TTTTATGACG TCATCATGCG TTACTTCTTC
AATGAAGTCA GTATTGGTAT GCAAGAGCTA GAATGGCACT TGTTCGCTGC CATGTTTATG
TTCGGGATTG GTTATACCTT AAAAGCCGAC GGCCACGTGC GCGTCGATGT ATTTTACGAC
AACTTTAGCC CTCGAGTGAA AGCCTATATC AACTTATTCG GGGCCTTGCT GTTTGTGCTG
CCCGTCACCC TGTTGATCCT TTATTACAGC TGGGACTACA CCCTTGAAGC CTACGAAATG
GGCGAAGGCA GTGCCGATCC TGGTGGCTTG CCCCACCGCT TTATCATTCG CGGTGTTATC
CCCGTTTCAT CGATGTTTCT GATTTTGTGC GCCCTGTACG TGATGCTCGA ACAAATACAA
CGTCTTAGCG GCACCTTTAC CCCCTCCACA GATCATAAGG ACGCCATCTA A
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| Protein sequence | MNTVVKLLGK FIDGVGHLCS VLMMLMILNV FYDVIMRYFF NEVSIGMQEL EWHLFAAMFM
FGIGYTLKAD GHVRVDVFYD NFSPRVKAYI NLFGALLFVL PVTLLILYYS WDYTLEAYEM
GEGSADPGGL PHRFIIRGVI PVSSMFLILC ALYVMLEQIQ RLSGTFTPST DHKDAI
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