Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2285 |
Symbol | |
ID | 4172439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2782102 |
End bp | 2783073 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 638055294 |
Product | hypothetical protein |
Protein accession | YP_661856 |
Protein GI | 109898601 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGGT TTAACAAATT CTTATATATA TTAAACAACG ATTGTCTAAA ACCCCCACTT TCATTATTAC GCACTATTGC GCTAGCAAAA AATAATCAGG TCGACCTGAC GGTGCTCCTT GTACTCCCTA CCCTTTCAAT TCCGAATTCG TTTAACACAG AAGGACTGAA CCCGATAGAA ATTGAACAAG TTATCTTCAC TGAACAAGAG CAAAAGTTAA AGCAGTTGGT AACCTGTCTC GATGCAGACG TAAACATAAA CGTGCAGCTA AAAGTTGGCA AAAGATACCT TGAAATTGTG CGTCTAGTGC TAGCTGACAA ATATGACATG CTCATAAAAG AAGTGGACAA AGCAAACTGG CTCGACCATT TTATCGGTAG TGACGACATG CAGTTATTAC GCAATTGTCC TTGCCCTATC TGGCTCATGA AGAAAGACGA AAAGCCCCGT TATAAAAATA TTTTAGCTGC CGTCGATTTT GATTCTGAAG ATGTCAATAC ATGCAACGAT GAACTGAATC ATATGATTAT GAGTCTTTGC AGCTCTATCG CCGTGGCTGA GTTTTCGAGA ATACATGTGG CTACTGTTTA CAATGCAACT CATGCAGGCT TTGTCAGCTT ATGGGCCGAT AACCCGGAGA AAATCGAAGA AGAAATGCTA GAGTCAGAGT TTCGTAACAG TCGCTATAAA ATGGATTTAC TGTTTGACAA CGTAAAGCAA GAAATCGGAG TAGACTCTTT TAATTTTTTG TCATTAATCC CTCATATCGT TAAAGGGACC GCGGGTGAAG AGCTCCCAAA AATAGCCAAA AAGATAGATG CAGACTTAGT CGTTATGGGA ACGGTTGCCC GCACCGGAAT TGCTGGATTG GTGATAGGCA ACACCGCAGA GACCATTTTC AATCAGCTAA ACAGTTCGGT ATTGGCAATC AAGCCTCAAG GATTTGTTTC TCCTATAAAG TCAACGACGT AA
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Protein sequence | MKRFNKFLYI LNNDCLKPPL SLLRTIALAK NNQVDLTVLL VLPTLSIPNS FNTEGLNPIE IEQVIFTEQE QKLKQLVTCL DADVNINVQL KVGKRYLEIV RLVLADKYDM LIKEVDKANW LDHFIGSDDM QLLRNCPCPI WLMKKDEKPR YKNILAAVDF DSEDVNTCND ELNHMIMSLC SSIAVAEFSR IHVATVYNAT HAGFVSLWAD NPEKIEEEML ESEFRNSRYK MDLLFDNVKQ EIGVDSFNFL SLIPHIVKGT AGEELPKIAK KIDADLVVMG TVARTGIAGL VIGNTAETIF NQLNSSVLAI KPQGFVSPIK STT
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