Gene Patl_2285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2285 
Symbol 
ID4172439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2782102 
End bp2783073 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content41% 
IMG OID638055294 
Producthypothetical protein 
Protein accessionYP_661856 
Protein GI109898601 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGGT TTAACAAATT CTTATATATA TTAAACAACG ATTGTCTAAA ACCCCCACTT 
TCATTATTAC GCACTATTGC GCTAGCAAAA AATAATCAGG TCGACCTGAC GGTGCTCCTT
GTACTCCCTA CCCTTTCAAT TCCGAATTCG TTTAACACAG AAGGACTGAA CCCGATAGAA
ATTGAACAAG TTATCTTCAC TGAACAAGAG CAAAAGTTAA AGCAGTTGGT AACCTGTCTC
GATGCAGACG TAAACATAAA CGTGCAGCTA AAAGTTGGCA AAAGATACCT TGAAATTGTG
CGTCTAGTGC TAGCTGACAA ATATGACATG CTCATAAAAG AAGTGGACAA AGCAAACTGG
CTCGACCATT TTATCGGTAG TGACGACATG CAGTTATTAC GCAATTGTCC TTGCCCTATC
TGGCTCATGA AGAAAGACGA AAAGCCCCGT TATAAAAATA TTTTAGCTGC CGTCGATTTT
GATTCTGAAG ATGTCAATAC ATGCAACGAT GAACTGAATC ATATGATTAT GAGTCTTTGC
AGCTCTATCG CCGTGGCTGA GTTTTCGAGA ATACATGTGG CTACTGTTTA CAATGCAACT
CATGCAGGCT TTGTCAGCTT ATGGGCCGAT AACCCGGAGA AAATCGAAGA AGAAATGCTA
GAGTCAGAGT TTCGTAACAG TCGCTATAAA ATGGATTTAC TGTTTGACAA CGTAAAGCAA
GAAATCGGAG TAGACTCTTT TAATTTTTTG TCATTAATCC CTCATATCGT TAAAGGGACC
GCGGGTGAAG AGCTCCCAAA AATAGCCAAA AAGATAGATG CAGACTTAGT CGTTATGGGA
ACGGTTGCCC GCACCGGAAT TGCTGGATTG GTGATAGGCA ACACCGCAGA GACCATTTTC
AATCAGCTAA ACAGTTCGGT ATTGGCAATC AAGCCTCAAG GATTTGTTTC TCCTATAAAG
TCAACGACGT AA
 
Protein sequence
MKRFNKFLYI LNNDCLKPPL SLLRTIALAK NNQVDLTVLL VLPTLSIPNS FNTEGLNPIE 
IEQVIFTEQE QKLKQLVTCL DADVNINVQL KVGKRYLEIV RLVLADKYDM LIKEVDKANW
LDHFIGSDDM QLLRNCPCPI WLMKKDEKPR YKNILAAVDF DSEDVNTCND ELNHMIMSLC
SSIAVAEFSR IHVATVYNAT HAGFVSLWAD NPEKIEEEML ESEFRNSRYK MDLLFDNVKQ
EIGVDSFNFL SLIPHIVKGT AGEELPKIAK KIDADLVVMG TVARTGIAGL VIGNTAETIF
NQLNSSVLAI KPQGFVSPIK STT