| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2277 |
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| Symbol | |
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| ID | 4172431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2770832 |
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| End bp | 2771251 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055286 |
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| Product | biopolymer transport protein ExbD/TolR |
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| Protein accession | YP_661848 |
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| Protein GI | 109898593 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0227736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCTTAT TTAATCAAGC ACAGGGCTCA AAACGCAAAG CGAACAGTGA CGACAATCTG
ATCCCATTGA TTAACATCGT TTTTCTGTTA CTTATCTTCT TTATGATTGC AGGGAAAATC
GAGCAAATTC AGGATGCAGG ATTAACCTTG CCAGACAATA GCCAAACCAA ACCGGCTATC
GCACAACCAA TAACCCTACA ACTATCAAAA GACAATGAGA TCCATCTCAA TAATGAGGTT
GTCAGCGTTA ACGAATTACC TGAAGCATTG AGCACACTAT TACAGGAGCA CTCAGCCAAT
ATTGCTGTGC GCGCCGACAA AAAAGTGACG TACCAAGATT TAGACAAAGT GCTAGATATG
TTACGCGCTG CAGGGTTTAG CACCATCAAC TTATTCACCC TAACGACAGA GGCAAGTTGA
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| Protein sequence | MSLFNQAQGS KRKANSDDNL IPLINIVFLL LIFFMIAGKI EQIQDAGLTL PDNSQTKPAI
AQPITLQLSK DNEIHLNNEV VSVNELPEAL STLLQEHSAN IAVRADKKVT YQDLDKVLDM
LRAAGFSTIN LFTLTTEAS
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