Gene Patl_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2273 
Symbol 
ID4172427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2765464 
End bp2766147 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content44% 
IMG OID638055282 
Productputative hydroxylase 
Protein accessionYP_661844 
Protein GI109898589 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAACCG TTATTGAAGA CCTACTGTCT AAAAAAGAAG TTACCCAATT CACCCAAGCA 
TTAGATAAAG GCCAGTGGCT AGATGGTAAA CACACCGCGG GTAGTCAGGC TTCAAAAGTA 
AAATATAATC AACAACTTGA CGATGGCAGT GCATTGGCTA TCGAACTTCG AAATACGGTC 
ATTCGTAAAT TATCGGGAAA TGCGTTGTTT ATGTCTTCTG CACTGCCGAA TAAAATTTAT 
CCTCCTAAAT TTAATCGCTA CCAAGGCGGC GAGCATTACG GGTTACACGT AGATGCATCT 
GTGATGCCTA TTCCAAATAG TCATCAGATG CTACGCACAG ATTTATCTGC CACGTTGTTT 
TTATCAGAGC CAAAAACCTA CGATGGCGGC GAACTCAGTA TCGAAACCCA GTTTGGTTTG 
CAGCAAATTA AGCTCAATGC GGGTAGCGTG ATTCTGTATC CTGCTAATAG CCTTCATCAA 
GTTAATCCGG TGACAAAAGG GCGCAGAACA GCCTCGTTCT TTTGGATTGA AAGTCTAGTG 
CGCAGTAACG ATCAGCGCAG TATGTTGTTT GATTTGGACC AATCTATTCA AGCGCTTACG 
GTTGAGCTGG GCAGTAACGA TGCTGAAGTA AAACGCTTAA CTGGGGTGTA CCACAACCTG 
ATGCGCAGTT GGGCGACGTG CTAA
 
Protein sequence
MLTVIEDLLS KKEVTQFTQA LDKGQWLDGK HTAGSQASKV KYNQQLDDGS ALAIELRNTV 
IRKLSGNALF MSSALPNKIY PPKFNRYQGG EHYGLHVDAS VMPIPNSHQM LRTDLSATLF 
LSEPKTYDGG ELSIETQFGL QQIKLNAGSV ILYPANSLHQ VNPVTKGRRT ASFFWIESLV 
RSNDQRSMLF DLDQSIQALT VELGSNDAEV KRLTGVYHNL MRSWATC