Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2215 |
Symbol | |
ID | 4172367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2675611 |
End bp | 2676756 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055223 |
Product | carbamoyl-phosphate synthase, small subunit |
Protein accession | YP_661787 |
Protein GI | 109898532 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000311671 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGCTAATT CCGCCCTTTT AGTGCTAGAA GATGGGTCTG TTTTCAATGG CACGGCTATC GGAGCGACTG GTATGTCTGT TGGTGAAGTG GTGTTTAACA CCTCAATGAC AGGTTATCAG GAAATTCTTA CTGATCCCTC TTACGCAGAA CAAATCGTAA CTTTAACCTA TCCCCATATT GGTAACACCG GTACCAATAG CGAAGATTGT GAATCAACAA AAGTGTGGGC CAAAGGCCTT ATCATTAGAG ATTTACCGCT GCTAGCGAGT AATTTTCGTA GTGAACAATC GTTGTCTGAA TACCTTCGTG TAAATAATAT TCTTGGTATC GCAGATATCG ACACTCGCCG TTTAACGCGT ATTTTGCGTG ATAAAGGCGC GCAAAATGGC TGCATCATCG CAGTCGATTC AAGCTCTGAG ATTACGCTTG ATAAAGAATT GGCCCTTGAG AAGGCGAAAG CGTTCTCTGG TTTGAAAGGT TTGGATCTTG CCAAAGAAGT CACCACTGAC GAAGTCTACA GTTGGACCGA CGGTTCATGG ACGCTTGGCC AAGGCTTCAA CGAAAAGCAA ACTGATTTGC CGTTTCACGT CGTAGCCTAC GATTTTGGTG CCAAACACAA CATTTTACGT ATGTTAGTAG ACAGAGGCTG CCGATTAACG GTGGTACCTG CTAAAACCAC AGCAGAAGAT GTACTGGCGT TAAACCCAGA TGGCGTGTTT TTATCCAACG GCCCTGGTGA TCCTGAGCCT TGCGTTTACG CGATCGAAGC GATTAAGACC TTGCTCGATA AAAACCTGCC TATTTTTGGT ATCTGTTTAG GGCATCAATT ATTGGCACTA GCCAGTGGTG CAAAAACTGT AAAAATGAAA TTCGGTCATC ACGGTGCTAA CCACCCAGTG AAAGACATAC TTGGTCAGCG CGTCATGATC ACCAGCCAAA ACCACGGTTT CGCTGTTGAT GAACAATCGA TGCCTGACAA TTTAGATGTT ACCCATGTGT CATTGTTTGA CCAGTCATTA CAAGGTATAC ACCGTAATGA TAAGCCCGCG TTTAGCTTCC AGGGACACCC TGAAGCGAGC CCCGGCCCTC ATGACGCGGC ACCTTTGTTT GATCACTTCA TTAAATTGAT GCAAGCAACA CGCTAA
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Protein sequence | MANSALLVLE DGSVFNGTAI GATGMSVGEV VFNTSMTGYQ EILTDPSYAE QIVTLTYPHI GNTGTNSEDC ESTKVWAKGL IIRDLPLLAS NFRSEQSLSE YLRVNNILGI ADIDTRRLTR ILRDKGAQNG CIIAVDSSSE ITLDKELALE KAKAFSGLKG LDLAKEVTTD EVYSWTDGSW TLGQGFNEKQ TDLPFHVVAY DFGAKHNILR MLVDRGCRLT VVPAKTTAED VLALNPDGVF LSNGPGDPEP CVYAIEAIKT LLDKNLPIFG ICLGHQLLAL ASGAKTVKMK FGHHGANHPV KDILGQRVMI TSQNHGFAVD EQSMPDNLDV THVSLFDQSL QGIHRNDKPA FSFQGHPEAS PGPHDAAPLF DHFIKLMQAT R
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