Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2209 |
Symbol | |
ID | 4172361 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2667131 |
End bp | 2667991 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055217 |
Product | CBS domain-containing protein |
Protein accession | YP_661781 |
Protein GI | 109898526 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4535] Putative Mg2+ and Co2+ transporter CorC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG ATAACCCCCC CTCTACTAGC GGTTCTGCCA ACAAAGGTTG GTTGGATAAA ATAGTCCAAT CATTCACGGG AGAACCGAAA AGCAAAGACG AACTCTTCTC TGTCATCACT GATGCAGAAC AACGAGAAGT CATCAATCAA GAAACTCGCG AGATGATCGA AGGCGTCATG GAAGTCAGTG AGATGCGTGT TAGAGAGATC ATGATCCCTC GTGCTCAAAT GACCACTATT GATATTACTG AGACTGTAGA TAAATTTTTA CCGATCATGC TAGATTCGGC GCACTCCCGT TTTCCTGTCA TCAGCGAAGA CAAAGATCAT ATAGAAGGGA TCATCCTCGC TAAAGATTTA CTAAAATACG CATTTCTTCC GGGCAAAGAG TTTGAGCTCA AGCAGGTACT TCGCCCCGCA GTGATCGTGC CTGAAAGTAA ACGGGTTGAT GTGCTACTGA AAGAGTTCCA ACAAAAGCGC TTTCATATGG CCATTGTAGT GGATGAATAC GGCGGTGTTT CAGGTTTAGT GACTATCGAG GATATTCTCG AGCTGATCGT CGGTGAAATT GAAGATGAAC ATGACGCTGA AGAAACCAAT ACCGATAATA TACGTGCCTT AAACAAACAC ACTTATTCAG TCAAAGCGCT TACAGAATTA GAAGATTTCA ACGAGTTCTT TAAAACTGAT TTTGACGAAG AAGAGGCCGA TACCATAGGT GGGATTGTGC TAAAAGCGTT TGGTCATATG CCCATGCGCG ACGAGAAAGT CAGCATCAAT GGTTTCGTTT TTACGGTTAC CAACTCTGAC TCCAGACGCC TTATTCAATT AAAGGTTACC CTTCCCCACA GCGAAGATTA G
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Protein sequence | MSEDNPPSTS GSANKGWLDK IVQSFTGEPK SKDELFSVIT DAEQREVINQ ETREMIEGVM EVSEMRVREI MIPRAQMTTI DITETVDKFL PIMLDSAHSR FPVISEDKDH IEGIILAKDL LKYAFLPGKE FELKQVLRPA VIVPESKRVD VLLKEFQQKR FHMAIVVDEY GGVSGLVTIE DILELIVGEI EDEHDAEETN TDNIRALNKH TYSVKALTEL EDFNEFFKTD FDEEEADTIG GIVLKAFGHM PMRDEKVSIN GFVFTVTNSD SRRLIQLKVT LPHSED
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