| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2206 |
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| Symbol | |
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| ID | 4172358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2664143 |
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| End bp | 2665576 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055214 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_661778 |
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| Protein GI | 109898523 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0163044 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAAAA AACTTTTTAT TAAAACTTGG GGCTGTCAGA TGAACGAGTA TGACTCGCAG
AAGATGGCTG ACTTATTGGA TTCAACCCAT GGATATCAAG TTGCTGACAC CGCGGAAGAA
GCCGACATCA TTTTACTCAA TACGTGTTCT ATCCGCGAAA AAGCCCAAGA GAAAGTGTTT
CATCAATTGG GACGCTGGAA AAACCTCAAA CAAGATAAGC CTGAATTGAT CATTGGTGTT
GGTGGCTGCG TGGCATCGCA AGAAGGTCAG GTGATTCGTC AACGTGCGCC ATTTGTAGAT
TTAGTGTTTG GTCCGCAAAC GCTGCACCGT TTGCCAGAAA TGATAAATCA GATCAAAGGT
GGTAGCTCCT CCGTTATTGA TATTAGCTTC CCTGAGATAG AAAAGTTTGA CCGCTTGCCA
GAACCCAAAG CGGAAGGCCC GACGGCCTTT GTTTCTATTA TGGAAGGTTG CTCAAAATAT
TGTACTTTCT GCGTGGTACC TTATACCCGG GGCGAAGAAG TCAGTCGTCC AGTCGATGAT
GTATTACTTG AAGTCGCACA GCTAGCAGAA CAAGGTGTAC GTGAAGTCAA TTTGTTAGGT
CAAAACGTGA ATGCGTTTCG TGGCCCACAT CATGATGGCG CGATTTGTAC CTTTGCTGAG
TTACTAGAAA TGGTTGCCTC AATCGATGGT ATTGACCGTA TTCGTTACAC CACATCACAT
CCCGTTGAGT TCACTGACGA TATCATTGAT GCTTACGCGA CCATTCCTGA ATTAGTTGAT
CATTTACACC TGCCTGTACA GTCAGGCTCA GATCGTGTCT TGAATTTAAT GAAGCGAGGC
CATACTGCAA TAGAGTACAA GTCGAAAATT CGTAAGCTTA GGAAGATTCG TCCTAACTTA
AGTATGTCAT CAGACTTTAT CATCGGCTTT CCAGGTGAAA CTGACGATGA TTTTGAAGCG
ACAATGGATT TGATTCAAGC AATGGATTTC GATTTGAGCT TTAGCTTTAT TTACAGTGCG
CGTCCGGGTA CGCCGGCAGC AGATTTACCC GACGATGTAT CTGAAACAAC GAAAAAAGAG
CGTTTACAGC TATTGCAAAA TCGCATCACC CAGCAAGCGT TGCGCATTGC TCGGAATATG
ATTGACAGTG AACAACGAGT ATTAGTAGAA GGCCCATCTA AAAAGAATCC GATGGAGCTT
TCTGGGCGTA CTGAAAACAA CCGAGTGGTT AACTTTGAAG GCACTCCGGA TATGATTGGC
GGCTTTGTAG ATGTAAAAAT CACAGATGTG TTTGCCAACT CATTGCGCGG AGATGTTCTA
CGCAAAGAAG CCGACATGAA TTTACGTATC AATGTGGCGC CTCAGGCCAT ATTGGCCAAG
CAAACAAATA AAACCGATGC CTTAGGCGTC GCTCAGTTTG TGCCAGCACA TTGA
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| Protein sequence | MTKKLFIKTW GCQMNEYDSQ KMADLLDSTH GYQVADTAEE ADIILLNTCS IREKAQEKVF
HQLGRWKNLK QDKPELIIGV GGCVASQEGQ VIRQRAPFVD LVFGPQTLHR LPEMINQIKG
GSSSVIDISF PEIEKFDRLP EPKAEGPTAF VSIMEGCSKY CTFCVVPYTR GEEVSRPVDD
VLLEVAQLAE QGVREVNLLG QNVNAFRGPH HDGAICTFAE LLEMVASIDG IDRIRYTTSH
PVEFTDDIID AYATIPELVD HLHLPVQSGS DRVLNLMKRG HTAIEYKSKI RKLRKIRPNL
SMSSDFIIGF PGETDDDFEA TMDLIQAMDF DLSFSFIYSA RPGTPAADLP DDVSETTKKE
RLQLLQNRIT QQALRIARNM IDSEQRVLVE GPSKKNPMEL SGRTENNRVV NFEGTPDMIG
GFVDVKITDV FANSLRGDVL RKEADMNLRI NVAPQAILAK QTNKTDALGV AQFVPAH
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