| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2141 |
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| Symbol | |
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| ID | 4173396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2590282 |
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| End bp | 2592132 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055149 |
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| Product | acyl-CoA dehydrogenase-like |
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| Protein accession | YP_661713 |
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| Protein GI | 109898458 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGGCG TAAGCGGCAA GTTAATCAGA GAAGGTGTGG GTAAAATGAG TGAAGAATTA
GTCAGTCGTA AAGAACTAGC ATTTCAATTG TACGAGTTGC TCGATACAGA GTCCTTATGT
GATAAAGAGC GATTCAGTGA ACACAACAAA GATACGTTCG ATGCAGTCAT GGACACCGCG
GAGAAAATCG CACGGGAAAA GTTTGCACCA CATAATCGAA AGGCTGACCT CAATGAGCCG
ACCTTTGATG GTGAGAAAGT TCACATGATC CCTGAAGTAA AGGAGGCGTT CGATACCTAC
GCAGAATCAG GGTTAATTGC CGGCCGTTTC GATTTTGATG ATGGCGGTAT GCAACTGCCT
GAAACTATTA TGATGGCGTG TTCAAGTTAC TTTACCGCGT CGAACCCCTC CAGCACATCT
TACTCATTCT TGACAGTTGC CGCAGCCAAC GTGATCAAGA ACTTTGCTGA GCAGAGTATT
AAAGATAAGT TTATGCCGCG TATGCTCACA GGTGAGTTTA CTGGGACTAT GGCGTTAACT
GAGCCACATG CCGGTTCTTC TCTTGCTGAT ATAACCACAA ATGCAAAGCC GGCTGATGAT
GGTACGTATC GTATTAAGGG CAGTAAGATG TTCATTTCGG CGGGTGATCA TGAATTATCT
GACAACATTG TGCATTTGGT ACTAGCAAAA ATTCAAGGCG CGCCTGCGGG TGTTAAGGGT
ATTTCACTTT TTGTGGTGCC AAAATTTCGC CTCGATGAAA ACGGCGAGCC AGCACAGCGT
AATGATGTCT CACTGGCAGG ACTTATTCAT AAGATGGGGT ATCGAGGCAC TACTTCTACC
GTCTTATCGT TCGGCGAAAA AGACGATTGC CACGGCTACT TAGTAGGCGA AGCGCATCAA
GGCCTTAAGT ATATGTTCTT GATGATGAAC GAAGCGCGCA TTGGTGTTGG TTTTGGTGCC
GCTATGCTTG GGTATTCAGG CTATCGTTAC TCGTTGGGCT ACGCTAAAGA AAGAACACAG
GGGCGTGTTG CGCCAAACAA CAAACCGACC GACAAACCAG CCACTATCAT TAAACATGGT
GATGTAAAGC GCATGCTATT AGCGCAAAAG TCATATGTCG AAGGTGCTAT GTCATTGTGT
TTTTATGCTT CCAGACTAGT TGACGAACTG CATATAGCAG AAACACCAGA GGCGAAACAG
AGGACAGCTG AGCTGCTTGA TTTGTTAACC CCTGTGGTGA AAGCATGGCC CAGCGAATTC
GGCCCGAAAG CTAATGATTT AGCAATTCAA ATTCTGGGCG GCTCAGGCTA CACCAGAGAA
TATCCAGTAG AGCAGTGCTG GCGCGATAAC CGTTTAAATC CGATTCATGA GGGGACGAAC
GGTATTCAAG CGTTAGATCT GATGACACGT AAATTATGGC AGGCAGATGG CGCTGGTTTA
GTGCAATTAC AAAAAGTCAT GGGCGAAGAC TTCGCTAAAG CTCAACACCC AGTGAGCAAA
CAGCTTATCG CTGATCTTCA ACCTTACTTA TTAAGATTGC AAAAGCTTAT TCCGGTCATA
GGTGCGGAGT TAGCAGGTGA AAACCAAAAT GCACTGCTAG CCAATGCGAG TTGCTTTTTA
ACCATATTTG GCCAAGTAGT TGTCAGTTGG ATGTGGATCA GGCAGGCAAT TACGTCAGAA
GAAGCACTTA ATAAAAATGC GGTATCACAG GATGATGAAG CATTTTATCG CGGAAAATTA
CAAGCTGCGA AGTATTTCCT TGATTGGGAA TTACCATTGA CGGACCGGGA TTTTAAAGTG
TTAAGCAGCA TGAGTGACAG CTGCAGTGCG ATGCAAGAAA CTTGGTTTTA A
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| Protein sequence | MFGVSGKLIR EGVGKMSEEL VSRKELAFQL YELLDTESLC DKERFSEHNK DTFDAVMDTA
EKIAREKFAP HNRKADLNEP TFDGEKVHMI PEVKEAFDTY AESGLIAGRF DFDDGGMQLP
ETIMMACSSY FTASNPSSTS YSFLTVAAAN VIKNFAEQSI KDKFMPRMLT GEFTGTMALT
EPHAGSSLAD ITTNAKPADD GTYRIKGSKM FISAGDHELS DNIVHLVLAK IQGAPAGVKG
ISLFVVPKFR LDENGEPAQR NDVSLAGLIH KMGYRGTTST VLSFGEKDDC HGYLVGEAHQ
GLKYMFLMMN EARIGVGFGA AMLGYSGYRY SLGYAKERTQ GRVAPNNKPT DKPATIIKHG
DVKRMLLAQK SYVEGAMSLC FYASRLVDEL HIAETPEAKQ RTAELLDLLT PVVKAWPSEF
GPKANDLAIQ ILGGSGYTRE YPVEQCWRDN RLNPIHEGTN GIQALDLMTR KLWQADGAGL
VQLQKVMGED FAKAQHPVSK QLIADLQPYL LRLQKLIPVI GAELAGENQN ALLANASCFL
TIFGQVVVSW MWIRQAITSE EALNKNAVSQ DDEAFYRGKL QAAKYFLDWE LPLTDRDFKV
LSSMSDSCSA MQETWF
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