| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2129 |
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| Symbol | |
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| ID | 4173384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2575532 |
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| End bp | 2576392 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055137 |
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| Product | dTDP-4-dehydrorhamnose reductase |
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| Protein accession | YP_661701 |
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| Protein GI | 109898446 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1091] dTDP-4-dehydrorhamnose reductase |
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| TIGRFAM ID | [TIGR01214] dTDP-4-dehydrorhamnose reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGTAC TTATCACTGG AAAAAAAGGT CAACTAGGGT GGGAGCTTTG TAACCGCGCT
CCCGAACCTA CTGTTGAGGT GTTCGCTTTT GATAGCGCAG AGCTCGATAT AACTGATGCT
AAAAAAGTTG CTGAAATTTT TTCATCTATT CAACCTAACG TGGTTATTAA TTGCGCAGCT
TATACCGCAG TAGATAAAGC GGAGACAGAT GAAGCCACCG CCTTCTTAGT AAATGAAGAA
GGTGCTAAGA ATATCGCTAA CGGCTGTAAA GAAGTCGGTG CAAGGTTGTT ACACATATCA
ACTGATTTTG TTTTTGATGG GACTAAGTGT TCACCTTATA TCGTATCTGA TAGACCTAAC
CCGCTTGGAG TGTATGGCGC GTCAAAATTA GCAGGTGAGT TAGCCATTCA AAGCATGCTG
CCTGAGGCGA TTATTGTGCG AACGGCCTGG GTATATTCTA GCCATGGTAA TAACTTCGTT
AAAACCATGC TGCGGTTAAT GCAAGAGAAA TCCCAGCTAG GTATTGTCTC AGACCAAATT
GGTACACCCA CTTACGCTGC TGGGCTAGCT GATTGGCTTT GGGCGGTGGT CGACAAGCCT
GATATTAAAG GCATGTACCA TTGGACAGAT GCAGGCGTGG CCAGTTGGTA TGACTTTGCT
ATCGCTATCC AAGAGCTAGC ACTAGAAAAG GGACTTTTGC ATAAAGCGAT CTCAGTGCAG
CCAATCTATG CGGCCCAGTA CCCGACGCCG GCTAAAAGGC CCGCATTTTC TGTTGTCGAC
AAAACCGCGG CAGAACAGGA TTCAGGTGTC CAAACTGTCC ACTGGCGCAA GCAATTATCT
AATATGCTCG ATAATCTTTA G
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| Protein sequence | MKVLITGKKG QLGWELCNRA PEPTVEVFAF DSAELDITDA KKVAEIFSSI QPNVVINCAA
YTAVDKAETD EATAFLVNEE GAKNIANGCK EVGARLLHIS TDFVFDGTKC SPYIVSDRPN
PLGVYGASKL AGELAIQSML PEAIIVRTAW VYSSHGNNFV KTMLRLMQEK SQLGIVSDQI
GTPTYAAGLA DWLWAVVDKP DIKGMYHWTD AGVASWYDFA IAIQELALEK GLLHKAISVQ
PIYAAQYPTP AKRPAFSVVD KTAAEQDSGV QTVHWRKQLS NMLDNL
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