| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2123 |
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| Symbol | |
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| ID | 4173378 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2571058 |
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| End bp | 2571987 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055131 |
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| Product | malonyl CoA-acyl carrier protein transacylase |
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| Protein accession | YP_661695 |
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| Protein GI | 109898440 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
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| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000456059 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCAAAAC GCGCGTGGGT GTTCCCAGGT CAGGGTTCAC AAACAGTGGG CATGTTGAAA
GACTTAGCGG CTCATCATCC GCTAGTAGAA GAAACATTTA GCCGGGCAAG CAAGGTCTTA
GGTTACGACC TTTGGGACGT AGTACAAAAC GACAATGGGC AAACATTAGG ACAAACGCAG
GTGACACAGC CTGCGTTGTT AGCTGCTAGT TTCGCTATAT TCCAAGTTTT AAAAGCACAA
AGCGCTAATT TACCGCACTA TCTTGCAGGT CATAGCTTGG GAGAATACTC AGCCCTTGTG
TGTGCTGGTG TTCTATCATT TGAAGATGGC GTCAAATTAG TAGAAGCGCG CGGCCAGTTT
ATGCAGCAGG CTGTCCCTGA AGGGGTAGGA GCGATGTATG CGATCATTGG TCTTGATGAT
GCGAAAGTCA TTCAAGCATG CGAACAAGCG CAAAACGAAA CACAGCAAAT CGTATCTGCG
GTAAACTTTA ATTCACCAGG CCAAGTCGTT ATTGCAGGCA ATGCAGAAGC TGCTGAAAAA
TCAGCTGAGC TGTGCAAAGA AGCGGGCGCT AAACGCGCTC TACCTCTAGC AGTAAGTGTG
CCTTCTCACT GTGCTTTGAT GAAACCCGCT GCAGATAAAC TTGCTGAGCT ATTTGAAACT
ATTGAGTTTA CAACCCCTTC TATAGGGGTG GTAAACAATG TTGATGTCGC TATTGAATCT
AATGTAGAAG ATATTAAATC TGCACTTTTG CGCCAGTTAT ATAGCCCAGT GCGTTGGACT
GAAACCATTC AAAAGCTATC CGCTTTAGGC GTAAGCCAGA TTCATGAAAT TGGCCCAGGT
AAGGTGTTAA CTGGCTTGAT AAAACGCATA GATAAATCAT TGAGCTGTGA TGCGGTAAAC
AACGCAGAAA CAGTATCGAC AATTCAATAA
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| Protein sequence | MSKRAWVFPG QGSQTVGMLK DLAAHHPLVE ETFSRASKVL GYDLWDVVQN DNGQTLGQTQ
VTQPALLAAS FAIFQVLKAQ SANLPHYLAG HSLGEYSALV CAGVLSFEDG VKLVEARGQF
MQQAVPEGVG AMYAIIGLDD AKVIQACEQA QNETQQIVSA VNFNSPGQVV IAGNAEAAEK
SAELCKEAGA KRALPLAVSV PSHCALMKPA ADKLAELFET IEFTTPSIGV VNNVDVAIES
NVEDIKSALL RQLYSPVRWT ETIQKLSALG VSQIHEIGPG KVLTGLIKRI DKSLSCDAVN
NAETVSTIQ
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