| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2110 |
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| Symbol | |
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| ID | 4173789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2555257 |
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| End bp | 2556726 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055118 |
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| Product | 6-phosphogluconate dehydrogenase |
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| Protein accession | YP_661682 |
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| Protein GI | 109898427 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0362] 6-phosphogluconate dehydrogenase |
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| TIGRFAM ID | [TIGR00873] 6-phosphogluconate dehydrogenase, decarboxylating |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGCA AGTCGGACAT CGGTTTAGTC GGTTTAGCCG TAATGGGTGA GAATTTGATC
CTTAATATGG AATCAAAAGG TTTCACTGTA ACTGCCTATA ACAGAAGTTA TTCAAAGGTT
GAAAAATTTA TTGGCGGGCG CGCTAAAGGT AAAAATATCC GCGGTGCAGA CAGCGTACAA
TCCTTAGTGG AATCTCTTGC CACTCCACGT AAAGTGATGC TGATGGTCAA AGCAGGCCAA
GCTGTAGATG ATTTCATCGA ACAGCTTATT CCTTTTCTGG ACGAAGGCGA CATCATCATT
GACGGTGGCA ATACACACTT CCCAGATTCA AATCGCAGAA CTGAGTATTT AGAGAGCAAA
GGCTTATTGT ATATCGGTAC GGGTGTGTCT GGTGGCGAAG AGGGGGCTTT GAAGGGTCCT
TCTATTATGC CTGGCGGCTC AAAAAAAGCG TGGCCATTAG TTAAGGATAT TTTCCAAGCT
ATCTCAGCCA AAGTGGCTGA TGAAAATGGT AACGAAGTTG TTCCTTGCTG TGATTGGGTC
GGCGATGCTG GCGCGGGTCA TTTTGTAAAA ATGGTGCACA ACGGTATCGA ATACGGTGAC
ATGCAACTCA TCTGCGAAGC CTACCAATTA ATGAAAGTAG TACTTGGCTT AAACTCTGAT
GAGATCCAAA AAGTATTTGC GCATTGGAAT ACCACCGAAT TAGACAGCTA CCTTATCGAC
ATCACCAAAG ACATCTTTGC CTTCAAAGAT GAAGACGGTG AACCTCTGGT TGAAAAAATC
CTCGATACAG CAGGGCAAAA GGGCACGGGT AAATGGACTG GGGTGACCGC ACTGGATTTG
GGTGTACCGT TGACGTTAAT CGCTGATTCT GTGTTTGCTC GTTGTATTTC TGCAAAAAAA
GAGCAGCGTG TAGAAGCATC TAAGGTTGTG ACTGGACCTG AGGTTAACTT CACAGGAGAT
AAAGAAGCCT TTATCGAAAA CCTTCGCCAA GCAGTGCTTG CTGCTAAAAT CGTATCCTAT
GCTCAAGGTT ATATGCTAAT GCAAGAAGCC GCAAAAGAGT TCGGCTGGGA GCTTAACTAT
GGCGGTATCG CGCTAATGTG GCGTGGCGGA TGTATTATCC GTTCAGCGTT TTTAGGCAAG
ATAAAAGAAG CTTATGATAC CGATCCAAAG CTAGAAAATT TATTGCTAAC GCCTTATTTC
AAAGACACCG TGGAATCTGC TCAAGCAGGG TGGAGGAATG TGGTTGGCAC TGCAGTAATG
AATGGTATTG CCATTCCTTG CTTAAGCTCA GCATTAACCT ATTTTGATGG GTTTAGAACT
GCGCGCCTTC CAGCGAATTT GTTGCAAGCC CAACGCGACT ATTTCGGTGC CCACACGTAT
GAGCGCACTG ACAAGCCAAG AGGTGAGTTT TTCCACACCA ATTGGACTGG TCGTGGTGGC
GATACAGCCT CAACCACTTA CGACGTATAG
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| Protein sequence | MKSKSDIGLV GLAVMGENLI LNMESKGFTV TAYNRSYSKV EKFIGGRAKG KNIRGADSVQ
SLVESLATPR KVMLMVKAGQ AVDDFIEQLI PFLDEGDIII DGGNTHFPDS NRRTEYLESK
GLLYIGTGVS GGEEGALKGP SIMPGGSKKA WPLVKDIFQA ISAKVADENG NEVVPCCDWV
GDAGAGHFVK MVHNGIEYGD MQLICEAYQL MKVVLGLNSD EIQKVFAHWN TTELDSYLID
ITKDIFAFKD EDGEPLVEKI LDTAGQKGTG KWTGVTALDL GVPLTLIADS VFARCISAKK
EQRVEASKVV TGPEVNFTGD KEAFIENLRQ AVLAAKIVSY AQGYMLMQEA AKEFGWELNY
GGIALMWRGG CIIRSAFLGK IKEAYDTDPK LENLLLTPYF KDTVESAQAG WRNVVGTAVM
NGIAIPCLSS ALTYFDGFRT ARLPANLLQA QRDYFGAHTY ERTDKPRGEF FHTNWTGRGG
DTASTTYDV
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