Gene Patl_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2081 
Symbol 
ID4173760 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2525209 
End bp2526099 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content43% 
IMG OID638055089 
Productphospholipase A1 
Protein accessionYP_661653 
Protein GI109898398 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2829] Outer membrane phospholipase A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAAAC AAATGGAATT ATCTGCCGAT GAAATAACGC TCGGGGAGAT ACGAGCACTC 
TGCTCACAAG ACAGCGCCAA CCGTGTGCAG AAACGAGATC GCCTCGAACA TAGAGCGTCA
CTCAATCCAT TTGCGCTCTT ACCTCACAAA CCGAATTACT TATTACCCGT TACTTTTGCC
AATATCAGCA AGCGGCCCTA CGAGGGAGAT CCTAAAGCTG AAAAATACCA AGACACAGAA
GCAAAATTTC AAATCTCTTT GAAATATTTA GCGGTTGAAG ATTTAATGTG GGATGGACTT
GATGTACAAG TTGCCTTTAC GGTCGCTAGC TATTGGCAAG CTTACAATGG GGAGATATCG
GCACCATTTC GAGAAACAAA TTACGAGCCT GAAATTATTT TTAACTATAG CCGTCCATGG
AGTTTGCTCG GGTTACCGAT AGAGCAAACT TTCGTATCGC TAAACCATCA ATCTAATGGT
CAAACAGGCG AGTTATCCAG AAGTTGGAAT CGTATTATTG GTGGTGTTGT TTTTGCGCAG
AATGCGAATG TCACTTGGGG TTTACGAACA TGGTGGCGAA TACCAGAAGA AGATAAGCAG
TCTTTTGATG ATCCAGACGG AGACGACAAC CCGTATATCG AGCGCTACAT GGGGTATGGT
GAAATTGGCG GAGTATGGAG TATATCTGAC AATCACACCT TAGAACTCTT GTTGAGAAAT
AACCTTAGAA GTGATAATCG CGGCGCAGTG CAACTGGGTT GGACCTTTCC AATCACTCGT
CATCTCAGAG GGTATGTGGA GTACTTCAAT GGATACGGAG AAAGCTTAAT CTATTACAAT
CAACATACTC AACGCTTGGG TCTTGGGGTT AAACTTACCA ACTGGTTATA A
 
Protein sequence
MLKQMELSAD EITLGEIRAL CSQDSANRVQ KRDRLEHRAS LNPFALLPHK PNYLLPVTFA 
NISKRPYEGD PKAEKYQDTE AKFQISLKYL AVEDLMWDGL DVQVAFTVAS YWQAYNGEIS
APFRETNYEP EIIFNYSRPW SLLGLPIEQT FVSLNHQSNG QTGELSRSWN RIIGGVVFAQ
NANVTWGLRT WWRIPEEDKQ SFDDPDGDDN PYIERYMGYG EIGGVWSISD NHTLELLLRN
NLRSDNRGAV QLGWTFPITR HLRGYVEYFN GYGESLIYYN QHTQRLGLGV KLTNWL