| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2079 |
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| Symbol | |
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| ID | 4173758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2522703 |
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| End bp | 2523233 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055087 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_661651 |
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| Protein GI | 109898396 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCATGACT TAACGGATGT TCAACTAGTA AAACGTACTT TGCAACGCCG CGGCGATGCA
TCGATGGCCT TTGCTAAGCT GTATGGACGA TATCAAGGGA AAATCGCCGC TTATATTGCA
GCGAAGGTTC TGTACAACTC GTCGTTAGTA GACGATGTAC TGCAAGACAC CTTCATGACT
GCATGGCACA AGCTAGAGCA ACTCAAAGAG CATGATAAGT TTTTTCCTTG GGTGGTTACC
ATCGCGCGTA ACACCGCTAT GGATGTATTA CGTGAAAAAA AGCGCGTAGA CGATATCAGT
CATCTGTTAA ATCAAGAAGA GTCCGAAACC GAGGAAGAGC TCGACCTTGG AGCAACTGAA
CAAATGCTCG CAAGCTTGGA GCCCCTAGAC CGGGAAATAG TGGTCATGAA AGCGATACTA
GAGTGCTCAT TTGACGAAAT AAGCTTGCAG TTAGGTTTAG CGTTAAGTGC CAGTAAGATG
CGCTATTATC GCGCACTCGA CAAAGTGAAA AGCGATTTAT CCCAGCAGTG A
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| Protein sequence | MHDLTDVQLV KRTLQRRGDA SMAFAKLYGR YQGKIAAYIA AKVLYNSSLV DDVLQDTFMT
AWHKLEQLKE HDKFFPWVVT IARNTAMDVL REKKRVDDIS HLLNQEESET EEELDLGATE
QMLASLEPLD REIVVMKAIL ECSFDEISLQ LGLALSASKM RYYRALDKVK SDLSQQ
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