| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2073 |
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| Symbol | |
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| ID | 4173752 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2517891 |
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| End bp | 2519330 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055081 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_661645 |
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| Protein GI | 109898390 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0157886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG CGATTCAAGT ACACCCTGAC TACAACTACA AAGTTGTTCG TCAGTTTGCA
GTTATGACGG TCGTCTGGGG CATTATTGGC ATGTCGTTAG GCGTGTTTAT TGCGGCCCAG
TTATATTGGC CAGCCCTTAA TTTTGACACA CCATGGTTAA CGTTTTCACG TTTAAGGCCT
TTACACACCA ATGCGGTTAT TTTCGCGTTT GGTGGGTGTG CATTGATGGC AACCTCATTT
TATGTGGTTC AACGTACCTC TCAGGTACGT ATATTCAGTG ACAAGCTCGC AGCATTCACT
TTTTGGGGAT GGCAAGCGGT TATTCTTTCG GCGGTAGTCA CCTTACCTAT GGGTTTGACC
TCAACCAAAG AATACGCTGA ATTAGAGTGG CCTATCGATA TCCTCATCGC CTTAGTGTGG
TCCGCATACA TGATTAACTT TTTCGGAACG ATGATTATCC GCAAGGTTTC TCATATATAT
GTAGCCAACT GGTTCTTCGG TGCATTTATC CTTACCGTGC TTGTACTTCA CATTGGTAAC
AGTATGGCCG TGCCCGTTTC GTTGTTTAAA TCTTATTCAA TGTATGCTGG TGCGGTAGAT
GCCATCATGC AGTGGTGGTA TGGACACAAC GCTGTTGGTT TCTTCTTAAC AGCCGGTTTC
TTAGGGATGA TGTACTACTT CGTACCGAAG CAAGCTGGAC GTCCGGTGTA CTCTTACCGT
TTGTCAGTTG TTCACTTCTG GGCTTTGATT TCACTTTACA TTTGGGCTGG TCCTCATCAC
CTTCATTACA CTGCCTTGCC AGATTGGACC CAATCTGTCG GTATGGTGAT GTCCATCATC
CTGTTCGTTC CTTCATGGGG CGGCATGATA AACGGTATTA TGACCCTATC AGGCGCTTGG
CATAAACTGC GCACCGATCC CATTTTGCGC TTCTTAGTGG TTTCATTGTC ATTCTACGGG
ATGTCTACGT TTGAAGGCCC GATGATGGCA ATCAAAACGG TTAATGCACT GTCTCACTAT
ACTGACTGGA CTATAGGACA TGTTCACTCA GGTGCATTAG GTTGGGTAGC GATGGTGTCT
ATCGGCTCTA TTTACCACCT TATTCCTGTG CTATTTAATA AACCCAAAAT GCACAGCATC
TACCTTATCA ACGTTCACTT CTGGTTAGCG ACAATTGGCG TGGTGTTATA CATAGTAGCG
ATGTGGATGT CAGGTGTTCT ACAAGGTCTA ATGTGGCGCG CGGTGAATGC TGATGGCACA
CTTACCTATA GCTTTGTTGA AGCGCTTGAA GCGTCTAAAC CTTTCTACTT TGTACGCTTC
CTAGGCGGTG TCTTTGTTGT CGTTGGTATG CTGATTATGG CTTACAACTG CTACATGACC
ATCCGTTCTA AGTCTGAAGA CGAGACTGCT CGTTCAGACG CCGAAGTTCA ACCAGCGTAG
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| Protein sequence | MSEAIQVHPD YNYKVVRQFA VMTVVWGIIG MSLGVFIAAQ LYWPALNFDT PWLTFSRLRP
LHTNAVIFAF GGCALMATSF YVVQRTSQVR IFSDKLAAFT FWGWQAVILS AVVTLPMGLT
STKEYAELEW PIDILIALVW SAYMINFFGT MIIRKVSHIY VANWFFGAFI LTVLVLHIGN
SMAVPVSLFK SYSMYAGAVD AIMQWWYGHN AVGFFLTAGF LGMMYYFVPK QAGRPVYSYR
LSVVHFWALI SLYIWAGPHH LHYTALPDWT QSVGMVMSII LFVPSWGGMI NGIMTLSGAW
HKLRTDPILR FLVVSLSFYG MSTFEGPMMA IKTVNALSHY TDWTIGHVHS GALGWVAMVS
IGSIYHLIPV LFNKPKMHSI YLINVHFWLA TIGVVLYIVA MWMSGVLQGL MWRAVNADGT
LTYSFVEALE ASKPFYFVRF LGGVFVVVGM LIMAYNCYMT IRSKSEDETA RSDAEVQPA
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