Gene Patl_2066 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2066 
Symbol 
ID4173745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2512282 
End bp2512944 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content46% 
IMG OID638055074 
Productintegral membrane protein 
Protein accessionYP_661638 
Protein GI109898383 
COG category[S] Function unknown 
COG ID[COG2836] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAGCC TTAGTATTGC TTCAGCCTTT TTAATCGGAT TAGCGGGCAG TGTGCATTGC 
TTTGGTATGT GTGGCGGCGT TGTCAGCGCC TTCAGCTTTG CGGTGCCAAA AGGGGCAAAA 
CAGTGGCCTT ATGTATTAAC CTATAATGTA GGTCGTATCG CCAGTTATAC CGCTTTAGGT 
GCTCTGACCG GCTATTTAGG CAGTATTGTT GAGCGAGCTG AAATATTAAA AGCCACACCA 
CTGCTACACA CCATCAGTGC CTTATTTCTA ATTGCAATGG CATGTTATGT GGGAAACTGG 
TGGCGGGGTT TACATTATGT AGAAAGAGTT GGCGCAAAAC TTTGGGTTCA CATTCGTCCA 
CTTTCTAAAG CATTACTACC TTTTAAAAAC CCGCTTTATG CGCTGCCCTA TGGCATTATT 
TGGGGCTGGC TTCCCTGCGG CTTAGTCTAC TCGACACTAA CTTGGAGTTT AGCCAGCGGT 
AGCTTTATAA ATGGCGCTTT AGTCATGCTG TTCTTTGGTT TGGGCACATT ACCGGCTTTA 
GTGGTTATGG CGGCGGGCGT AGAATCGATT AAACAGATTT TAGCGGCCCC TAAAACCCGT 
CAAGTGGTTG CAATATGCTT GCTGGTGTTC GGGCTATATA TGCTCTGGCA AGCTTATGCC 
TAA
 
Protein sequence
MNSLSIASAF LIGLAGSVHC FGMCGGVVSA FSFAVPKGAK QWPYVLTYNV GRIASYTALG 
ALTGYLGSIV ERAEILKATP LLHTISALFL IAMACYVGNW WRGLHYVERV GAKLWVHIRP 
LSKALLPFKN PLYALPYGII WGWLPCGLVY STLTWSLASG SFINGALVML FFGLGTLPAL 
VVMAAGVESI KQILAAPKTR QVVAICLLVF GLYMLWQAYA