Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2063 |
Symbol | |
ID | 4173742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2508880 |
End bp | 2509863 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638055071 |
Product | patatin |
Protein accession | YP_661635 |
Protein GI | 109898380 |
COG category | [R] General function prediction only |
COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.340331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGATAG GAATAGCCCT CGGCAGTGGA GCCGCTCGTG GCTGGGCACA CATAGGTGTG ATCCAAGCGC TTGAAGAGCT AGGGATAAAA ATTGATGTGG TTGCCGGTTG CTCAATTGGT GCTTACGTTG GCGCAGCCTA TTCGTCGAAC AAACTAGACC CATTAGAAGA GTGGGTTCGC AGTTTAACCG AATGGCAAGT GTTTGCTTTA ATGGGTGTCG GCTTATACCG CGGCGGTTTA GTCAGCGGTT TGAAAGTTTT CAAAGCATTG CAAGATAACT TCAGTGAAGA AACGTTTGAA GAGCTATGTA AACCGTTTGC TTGTGTCGCA ACCGATTTAT ACAGCGGCCG AGAAATCAAT TTTTTAACTG GCTCTGTGGT TGATGCGGTG CGCGCGTCTT GTGCTATTCC AGGCTTATTC CCCCCTACAA CCTTCAACGA CCGCTGGCTA GTCGACGGTG GTGTGGTTAA CCCGGTCCCC GTAAACTTAT GTCGTCATTT AGGTGCAGAT ATCGTTTTTG CCGTTAACCT CAGTGCTGAT TTTCGGCCAC AAGCTATGGA TAACAACGAA AAAGAACGTG AGCGCAATCA ACAAAAAATC TCAGACATGT TCAGTAAAAG TCAAAACTCA CTGTCAAAAT GGTTCAAAAG CGATAAGAAA GACAAAGACA ACAAGGACAT TGATGAAGAC AGCAAACCTG ATGATCAAGA TGATGTGGAG CTTCACAGTG AAGCAGCTCG CCCCCGGGCG GCTAAAAACC ATCCCCCCAG CATGATAGGT GTCATGGCTG GCTCTTTAGA TATATTACAA GCACGTGTCA CCCGTTCACG TTTAGCCGGT AATCCCCCTG ATATTCTGAT AGAGCCACAA CTACGTGATT TCGGCATGAT GGAGTTCTAC CGGGCGGGAG AACTAATTGA AGAAGGTCGA AACAGTGTAA AGCGTATTGC TGATCAAATT CGCTATCAAT TACGCTTAGA TTAG
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Protein sequence | MKIGIALGSG AARGWAHIGV IQALEELGIK IDVVAGCSIG AYVGAAYSSN KLDPLEEWVR SLTEWQVFAL MGVGLYRGGL VSGLKVFKAL QDNFSEETFE ELCKPFACVA TDLYSGREIN FLTGSVVDAV RASCAIPGLF PPTTFNDRWL VDGGVVNPVP VNLCRHLGAD IVFAVNLSAD FRPQAMDNNE KERERNQQKI SDMFSKSQNS LSKWFKSDKK DKDNKDIDED SKPDDQDDVE LHSEAARPRA AKNHPPSMIG VMAGSLDILQ ARVTRSRLAG NPPDILIEPQ LRDFGMMEFY RAGELIEEGR NSVKRIADQI RYQLRLD
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