Gene Patl_2063 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2063 
Symbol 
ID4173742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2508880 
End bp2509863 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content47% 
IMG OID638055071 
Productpatatin 
Protein accessionYP_661635 
Protein GI109898380 
COG category[R] General function prediction only 
COG ID[COG1752] Predicted esterase of the alpha-beta hydrolase superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.340331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAGATAG GAATAGCCCT CGGCAGTGGA GCCGCTCGTG GCTGGGCACA CATAGGTGTG 
ATCCAAGCGC TTGAAGAGCT AGGGATAAAA ATTGATGTGG TTGCCGGTTG CTCAATTGGT
GCTTACGTTG GCGCAGCCTA TTCGTCGAAC AAACTAGACC CATTAGAAGA GTGGGTTCGC
AGTTTAACCG AATGGCAAGT GTTTGCTTTA ATGGGTGTCG GCTTATACCG CGGCGGTTTA
GTCAGCGGTT TGAAAGTTTT CAAAGCATTG CAAGATAACT TCAGTGAAGA AACGTTTGAA
GAGCTATGTA AACCGTTTGC TTGTGTCGCA ACCGATTTAT ACAGCGGCCG AGAAATCAAT
TTTTTAACTG GCTCTGTGGT TGATGCGGTG CGCGCGTCTT GTGCTATTCC AGGCTTATTC
CCCCCTACAA CCTTCAACGA CCGCTGGCTA GTCGACGGTG GTGTGGTTAA CCCGGTCCCC
GTAAACTTAT GTCGTCATTT AGGTGCAGAT ATCGTTTTTG CCGTTAACCT CAGTGCTGAT
TTTCGGCCAC AAGCTATGGA TAACAACGAA AAAGAACGTG AGCGCAATCA ACAAAAAATC
TCAGACATGT TCAGTAAAAG TCAAAACTCA CTGTCAAAAT GGTTCAAAAG CGATAAGAAA
GACAAAGACA ACAAGGACAT TGATGAAGAC AGCAAACCTG ATGATCAAGA TGATGTGGAG
CTTCACAGTG AAGCAGCTCG CCCCCGGGCG GCTAAAAACC ATCCCCCCAG CATGATAGGT
GTCATGGCTG GCTCTTTAGA TATATTACAA GCACGTGTCA CCCGTTCACG TTTAGCCGGT
AATCCCCCTG ATATTCTGAT AGAGCCACAA CTACGTGATT TCGGCATGAT GGAGTTCTAC
CGGGCGGGAG AACTAATTGA AGAAGGTCGA AACAGTGTAA AGCGTATTGC TGATCAAATT
CGCTATCAAT TACGCTTAGA TTAG
 
Protein sequence
MKIGIALGSG AARGWAHIGV IQALEELGIK IDVVAGCSIG AYVGAAYSSN KLDPLEEWVR 
SLTEWQVFAL MGVGLYRGGL VSGLKVFKAL QDNFSEETFE ELCKPFACVA TDLYSGREIN
FLTGSVVDAV RASCAIPGLF PPTTFNDRWL VDGGVVNPVP VNLCRHLGAD IVFAVNLSAD
FRPQAMDNNE KERERNQQKI SDMFSKSQNS LSKWFKSDKK DKDNKDIDED SKPDDQDDVE
LHSEAARPRA AKNHPPSMIG VMAGSLDILQ ARVTRSRLAG NPPDILIEPQ LRDFGMMEFY
RAGELIEEGR NSVKRIADQI RYQLRLD