| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2061 |
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| Symbol | |
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| ID | 4173740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2507132 |
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| End bp | 2507992 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055069 |
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| Product | mannosyl-glycoprotein endo-beta-N-acetylglucosamidase |
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| Protein accession | YP_661633 |
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| Protein GI | 109898378 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2992] Uncharacterized FlgJ-related protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATAACA CCCATAAAAC ATATCAAAAA TTTCGATATT TTGCAGTCGC ATGTGGCCTG
TTCGCCATTA TGTATATTGC CGATGATTAT TTTAAAAACC AATTACCTGA TACTGCACTG
CAACTCAGTG ACGATGAGAT GCGTATTTTA ATTGATGATA TTGGCCGGCA GTCTAAGGCG
TCTCCTCATT CCCTTGAGGC CAAAAAAATC CCGAACTTCA AAAAATATGA TGACGTCATT
GAGAAGAAGC GTGCATTTTT CGCCTATTTA TTACCTGAAA TACAACATCA AAATACGGTA
ACATTGATTA AGCGCCGCGC GGTCAAAAGC ATCGCCCAAC AACTTGAAGC GCATCATACT
TTAAGCCCCT TTACTGTTAA ATTGCTGAAA AATATGCGAC GCGAGTACAA GATTGACAAG
GGATTGACAG ATCTTCAAGC GACAGCAGTG TTGCTGCATC GGGTAGATAT GATCCCCCCT
GAGCTGGTGC TCATTCAAGC GGCTAACGAA TCAGGATGGG GCACATCTCG CTTCGCCAGA
AAGGGCTATA ACTTCTTTGG CTTGTGGTGT TTTAAAAAAG GTTGCGGTTT TGTTCCTAAG
CGCAGAAATG AAGGCACTGT GCACGAAGTG GCAAAATTTA AAGACTTATC CCACGCAGTT
AAAACCTATA TCAGAAACCT AAACCGACAT TATGCTTATA AGGAACTACG GGATATTCGC
GCTGACCTCC GCGCTCAAGA TAAAACAATT ACCGCTAGCG CGTTAGTGCA TGGCTTGCAA
AGCTATTCAG AGCGCGGCCA AGATTATATC GATGAATTAT TAAGCATGAT GAGAGTCAAT
AAAGAGTACA TGAATTTATG A
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| Protein sequence | MHNTHKTYQK FRYFAVACGL FAIMYIADDY FKNQLPDTAL QLSDDEMRIL IDDIGRQSKA
SPHSLEAKKI PNFKKYDDVI EKKRAFFAYL LPEIQHQNTV TLIKRRAVKS IAQQLEAHHT
LSPFTVKLLK NMRREYKIDK GLTDLQATAV LLHRVDMIPP ELVLIQAANE SGWGTSRFAR
KGYNFFGLWC FKKGCGFVPK RRNEGTVHEV AKFKDLSHAV KTYIRNLNRH YAYKELRDIR
ADLRAQDKTI TASALVHGLQ SYSERGQDYI DELLSMMRVN KEYMNL
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