| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2038 |
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| Symbol | |
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| ID | 4173912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2481970 |
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| End bp | 2483637 |
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| Gene Length | 1668 bp |
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| Protein Length | 555 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055046 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | YP_661610 |
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| Protein GI | 109898355 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.878718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGACT TTATTTTGCC AGATATTGGT GAAGGGATCG TAGAGTGTGA ATTGTTAGAA
TGGCTCGTCT GTGAAGGCGA TAGCATAGTA GAAGATCAGC CCGTCGCTGA GGTCATGACA
GACAAAGCCA CAGTGCAAAT TCCCGCTATG TACAGTGGCA CGGTAAAGAA ACTCTACTAT
CAAGCCGGTG AAATAGCCCA GGTCCACAAA CCTTTGTTTG CCATGGATAT TGAAGGGCAC
GAAAGTAGCC CATCCATCGA TTTACACGAC ACTACAGATA AATGCGCTAC TGATCATGCT
AACGACAATG ACCCCAGTAA AAAAACCAGT AACGTTAATC AACAAAATAA CAAAAATGGC
CAGGCGACAG CGTTTGAAGC AGCTCCAGAT GGTCCCTTAG AAACTTTTAT TTTGCCAGAT
ATTGGGGAGG GAATTGTAGA GTGCGAACTC GTCAAGTGGC TGGTAAGCGA AGGTGAAGAC
GTAATTGAAG ATCAGCCCGT GGTGGAAGTC ATGACCGACA AGGCATTGGT GGAAATTCCG
GCTAAGCACA GTGGTACGAT TGTTAGCCTG TGTTACCAGC GAGGTGATAT CGCTAACGTT
CATTCAGCAC TTTTTACCAT GCGTGTGGCT GGAGTTGACG ACAAAGCGCT GCCGCCATTG
GCAAGCGCTA CGCCATTGAC ATCAACAACT GAGATAACAC AGACGTCAAC CCCATTGGCT
GGCGTCCAAG CGAAGCAGGA TACTTCGTCT AAGATGTCAA AGGTAAATCA CAAAGTTCTG
GCTAGCCCAG CGGTTCGTCG TGTGGCCCGA GAGCAAGACA TTGATTTATC TAACGTGCAA
GGGTCAGGAG AAAAAGGGCG TATTTTGAAA TGCGATTTAA CGAAGCAACC ATCGAAGGCT
AGTGTTGTTA GCGCGCAAAC GCAAAGTGAT TCTGTAGGCG TCATCCAGAG TAAAGTACAA
GGTGGAACGC GAGTAGAGCG TATTAGCGGG ATAAAGGCCG CGATGGCTAG GCAGATGAAG
CACAGTGTGT CGACTATTCC GCATTTTACG GTCAGTGAAG AGATCCAAAT GGATGCTTTA
ATTGCCCTTC GCAGTCAATT GAAAGATGAC TTTAGTGAAC AGGGTGTAAA ATTAAGTTTT
ATGCCGTTTT TCATCAAAGC CTTATCATTG GCATTGAAAG CCTATCCTGT GATCAACAGT
CAAGTTAACG ATGACTGTAC ACAGCTAACT TATTTCAACG AGCACAATAT TGGGTTTGCG
GTGGACGGAA AACTCGGTTT GATGGTACCT AACATCAAAG GCGTGCAAGA TATGTCGATA
TTCGATATTG CCAAGCGTGC TTCTGAGTTG ATTGAGCAGG CAAGAGAAGG GCGTTTAAGA
ACGGCTGATA TCTCTGGTGG TACTATTAGT ATTTCAAATA TCGGTGTACT GGGTGGCACC
GTCGCAACCC CGGTGATCAA TCATCCTGAA GCCGCGATTG TGGCCTTAGG GAAAATTCAG
CGCTTGCCGC GCTTTGATGA AAACGATCAG GTGCGAGCTG TGAACATCAT GCATGTAAGT
TGGTCAGGTG ATCATCGCAT TATCGATGGC GCCACTATGG TCAGGTTTAA TAACCTATGG
AAGTCGTATA TTGAACAACC AATAAAAATG CTAGGCACAC TGCGTTAG
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| Protein sequence | MKDFILPDIG EGIVECELLE WLVCEGDSIV EDQPVAEVMT DKATVQIPAM YSGTVKKLYY
QAGEIAQVHK PLFAMDIEGH ESSPSIDLHD TTDKCATDHA NDNDPSKKTS NVNQQNNKNG
QATAFEAAPD GPLETFILPD IGEGIVECEL VKWLVSEGED VIEDQPVVEV MTDKALVEIP
AKHSGTIVSL CYQRGDIANV HSALFTMRVA GVDDKALPPL ASATPLTSTT EITQTSTPLA
GVQAKQDTSS KMSKVNHKVL ASPAVRRVAR EQDIDLSNVQ GSGEKGRILK CDLTKQPSKA
SVVSAQTQSD SVGVIQSKVQ GGTRVERISG IKAAMARQMK HSVSTIPHFT VSEEIQMDAL
IALRSQLKDD FSEQGVKLSF MPFFIKALSL ALKAYPVINS QVNDDCTQLT YFNEHNIGFA
VDGKLGLMVP NIKGVQDMSI FDIAKRASEL IEQAREGRLR TADISGGTIS ISNIGVLGGT
VATPVINHPE AAIVALGKIQ RLPRFDENDQ VRAVNIMHVS WSGDHRIIDG ATMVRFNNLW
KSYIEQPIKM LGTLR
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