Gene Patl_2022 details

Gene Information

• Locus tag: Patl_2022
• ID: 4173896
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: -
• Start bp: 2462554
• End bp: 2464506
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 638055030
• Product: phage integrase
• Protein accession: YP_661594
• Protein GI: 109898339

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAATTAG TTAATTTTAG AATACATGAT TTTAGTAAAA ATTTTTTGGT TGTGGACGGA 
GTGATGTTCA ATGATCTCAA GTGGCATATA CAGTGGGCAC AATCCGAGCA CTTGTTGTTG 
GACTTTGGTC GAGTGAAGCT AGAAAGTTGT TCTTTAACCG ATCATTCGGA ACTATATCGA 
TTTGCTAAAA TGATAACTTA CTACTGTTGT CCCAAGAAAG TAAATCTAAA TATTTCAAGC 
TGGAACACCA CACACAGTAG GTTTCTATCA ATTATAAATT TTATTCAAGA TTTTATTTGG 
CCGAATCAAC TTTTGTCAGC AAAAATGCTT TCTTCCGTTA CTGAAAAGCA ATTAAAAGAC 
CATCTAAATA TCATTATGCA GCGACTTGAG CTTGGAGTGT CAGGAAGCAC CCAAAGATAT 
CGGTTTTTCG TTAATGCACT TCAAGATTGG TCTGATTTTA CAAGACGAAA GCTACTTCCC 
AAAGAATACG GTTTGGATGT AAATATTGAC AATATACTGA CAAAAGATAT TCGCTCAAAA 
TGTAACTCGT TGATTGAAAA TCAGAGTGAC ACTTGGCAAC CATTGGCACC CGAAGTCATA 
GAGCTAATTT ATAAAGATGG ATGTCGCTAT TTGTATGACT TTGCAGACAC TATTATTGAG 
TGCCAAGAGT TAATCCGTAA CAGGCCTTTA GTCGGAACTG CAAACCGTAA ATACCGTGGG 
CAAATTAGAA GTGATGGTAA ATCGAAAGAG TTATTCAAAA CTTTACGCGA CATGAAGGTA 
CCGATGCTAG ATACCGAAAC GAAGCTTTTC AACTTCACTC CAGAAACCAA AAAAGTAAAG 
AGCGGCGGAT ACATTTGTGG TTGGCAACTA AGAACAACAA TTAATATTTC AGAAGTAAGA 
CCCGAAGTTA TTAATTTAAA AAGAGCTTGT ATTGTTTTGA TTGCCTTATT TACAGGCATG 
AGGCGGCGGG AAATAGCTGA ATTAAAGTCT ACCCCTGCAT TCAAAAAGAA TGGCGATTGG 
TATCTAGCAA TTACACGTTT TAAAACATCT GATGATGCCT CTGGAGCAGG TGAGCCAGAT 
GAAATACCTG TGCCACAAAT TGTATGCGAT GCCGTCAATG TTCTAATCAG ACTGTTTAAA 
GCAAATAGAC AACAGATGAC TAGTGATTAC TTGTTAGTTG CTGATATTTT AACACACAAA 
CAATATGAGA AGATTAAAAT ACAAACTGTA AGCAAGGATA TTAGAAAATA TATTTCTGAC 
GTAACGGGCA CTGACGGTCA CTCACATCAG CTACGTAAAA CACTAGCTTG GCTACTTATA 
TCAAGAAGCG AACATAATAT TGAATTGATT CGTCAACTTT TCGGTCATAA ATCTTTCGGC 
ATGACTTTAC GTTATATATT AAGAAATGAA CTGCTTGTGG GTAGTGTAAT GGAACTGATT 
GAACACAACT ATACAGAAGA TCTCAATGAT GCTTTTCAGT CAATTTCTGA TGGTAAAGCA 
GCAGGCAATC TATTCAGTCA AATTAAACAA AGAATGGAGG AACAAAATTA CAGGGGGCAA 
GTTTTGGCAG TTGACGTAGA AAGCTTTATT CACGAAGCAA TACAAGCGGG CGTACCTATG 
TTTATTTCAC GATTACCTAT TGGTGCGTTT TGTATAAAAG CTGGTGAATC TGAGGTCGTA 
CCTCCATGTA TGAAACGAAG CGATGCGAAA CTACCACAAA TTGAATTTTG TGATTATAAA 
AAATGTTCAC ATGTTCTACA CAATGACGAG TCTATGGCTA ACATTAATTC ACAAATTTCA 
TACTATGAGC AAAAACAAAA ATACTTACCT GTAGATGCAG ATAAGCGTGT CGTGTCTTAT 
TATAAAAATC AAGTCATTGA ACATCAGCAG CTCCTTGATC GCCTTGGAAA AAGTCTAAGC 
AATCCAGTTA GTGAAAAGTA TATTGATGGC TAA 

 

Protein sequence

MKLVNFRIHD FSKNFLVVDG VMFNDLKWHI QWAQSEHLLL DFGRVKLESC SLTDHSELYR 
FAKMITYYCC PKKVNLNISS WNTTHSRFLS IINFIQDFIW PNQLLSAKML SSVTEKQLKD 
HLNIIMQRLE LGVSGSTQRY RFFVNALQDW SDFTRRKLLP KEYGLDVNID NILTKDIRSK 
CNSLIENQSD TWQPLAPEVI ELIYKDGCRY LYDFADTIIE CQELIRNRPL VGTANRKYRG 
QIRSDGKSKE LFKTLRDMKV PMLDTETKLF NFTPETKKVK SGGYICGWQL RTTINISEVR 
PEVINLKRAC IVLIALFTGM RRREIAELKS TPAFKKNGDW YLAITRFKTS DDASGAGEPD 
EIPVPQIVCD AVNVLIRLFK ANRQQMTSDY LLVADILTHK QYEKIKIQTV SKDIRKYISD 
VTGTDGHSHQ LRKTLAWLLI SRSEHNIELI RQLFGHKSFG MTLRYILRNE LLVGSVMELI 
EHNYTEDLND AFQSISDGKA AGNLFSQIKQ RMEEQNYRGQ VLAVDVESFI HEAIQAGVPM 
FISRLPIGAF CIKAGESEVV PPCMKRSDAK LPQIEFCDYK KCSHVLHNDE SMANINSQIS 
YYEQKQKYLP VDADKRVVSY YKNQVIEHQQ LLDRLGKSLS NPVSEKYIDG