| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2009 |
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| Symbol | |
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| ID | 4173883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2450700 |
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| End bp | 2451218 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055017 |
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| Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
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| Protein accession | YP_661581 |
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| Protein GI | 109898326 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
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| TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.133572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAATCA ACCAAGACAG TTTTACAAAA GAAGAATTAT TGGCCTGTAG TCGAGGTGAG
TTATTTGGCC CAGGCAATAG CCAACTACCC GCCCCTAATA TGTTAATGAT GGATCGTATC
GTCAAAATAT CTGAAGAAGA CGGAGAGCAC GGAAAAGGGG TCATTATTGC TGAATTAGAT
ATTACGCCAG ATCTATGGTT CTTTGACTGT CACTTCCCCG GCGATCCTGT TATGCCTGGA
TGTCTAGGCC TGGACGCTAT GTGGCAATTA GTTGGTTTCT TTTTAGGTTG GTGTGGCGGA
CCGGGCAAAG GCCGTGCGCT AGGTGTGGGT GAAGTAAAGT TCTCTGGTCA AATTCTGCCA
ACCGCTAAGA AAGTAACCTA TAAAATCGAT ATGAAGCGTG TCATTAAACG TAAATTATTT
ATGGGTATCG GTGATGGTGA AGTGTCTGTA GATGGACGCG TTATCTATCA AGCGAAAGAT
CTAAAAGTAG GTTTGTTCCA AGATACCAGC AATTTCTAA
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| Protein sequence | MTINQDSFTK EELLACSRGE LFGPGNSQLP APNMLMMDRI VKISEEDGEH GKGVIIAELD
ITPDLWFFDC HFPGDPVMPG CLGLDAMWQL VGFFLGWCGG PGKGRALGVG EVKFSGQILP
TAKKVTYKID MKRVIKRKLF MGIGDGEVSV DGRVIYQAKD LKVGLFQDTS NF
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