| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2006 |
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| Symbol | |
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| ID | 4173880 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2446484 |
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| End bp | 2448427 |
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| Gene Length | 1944 bp |
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| Protein Length | 647 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055014 |
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| Product | ABC transporter related |
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| Protein accession | YP_661578 |
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| Protein GI | 109898323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCCTTTC GACGAACAAC AATTAAGAGA GTTTTTGTCT TGAGTTTATT ACAACTTAAA
AATGCCAGTA TTATCTTCGG TCACCCACCT TTATTAAGTG GTGTCGAACT TGTCATTCAA
CCTGGTGAAA GAGTCTGTTT AGTAGGCCGT AATGGTTGCG GTAAGTCTAC TTTGCTTAAA
ATTATTGCCG GTGAGCTAAA ACTTGATGAT GGCCAGCGCT TAGTTGGCAA CCAAGTTAAA
ATTTCGCGTT TACCGCAAGA TCCACCGCAA AGTGTAGAGT GCAGCTTATT TGATTATGTC
GCTGAAGGCA TGGCTGAGGT AGGGGAGCTA CTTAAAGCCT ACTTCCATCA GACGCATGTT
ATTGCAACAG ATTACAGTGA AGCGCAAATG GACAAGTTGG AAAAGCTTCA GCAGCAATTA
GACCATCACA ACGCCTGGCA GTTTGAACAA AAAATCATGC AGGTGTTAAC CCAGTTAAAG
CTAGACCCTG ATCAGCAGTT ATCTTCATTA TCTGGTGGCT GGCGTCGTAA GGCTGCACTT
GCCCGTGCCT TAGCGAATCA ACCCGACATT TTATTATTGG ATGAACCAAC CAACCACCTT
GATATTAGTA TGATCAAGTG GTTAGAGAAC ACCGTACTGG ATTACCAAGG TGCGGTTGTG
TTTGTCAGCC ATGACAGAGC GTTTATTCGT AATGTTGCCA CCCGTATTGT TGATTTAGAC
CGTGGTCAGT TGGTCAGTTA TCCAGGTAAT TATCAAGAAT ACCTAGATAA AAAAGCCCAC
GATTTGGAAG TCGAAGAAAC CCAGAATGCA TTATTCGATA AGAAGTTAAG CCAAGAAGAA
GCATGGATCC GCCAAGGTGT GAAAGCACGC CGTACTCGCA ATGAAGGGCG CGTTCGTGCA
CTGAAGGCTC TGCGCAATGA GCGTAGCGAG AGGCGAGATG TTCAAGGCAG AGCGGTTGTT
ACCTTAGGAC AAGGGCAAAA TTCAGGCAAA ATTATATTCG AAGCAGAGAA CCTCAGTTAT
AAAATTGAGG ATAAGAATAT TGTCGACCAT CTAGATTTTA CCGTGTTTCG TGGTGACAAA
ATTGCACTTA TTGGCCCCAA TGGTTGCGGT AAAAGTACGC TTATAAAATT GCTGCTTGAG
CAACTAGAAC CTTCATCAGG CACAGTCCGC TGTGGCACTA AAATAGATTT GGCTTATTTC
GATCAGCATC GTTCACAGCT AGACGTATCA CTAAAAGTGA TTGATGCCAT TGCTGATGGT
AAGCGTGAAG TTGATATAAA CGGTAACAGC AAGCATGTTA TTAGCTATTT GCAAGATTAC
TTGTTTACAC CTGAAAGAGT TAATGTACCC GTCAGTTCTT TATCTGGGGG AGAAAAAAAC
CGCTTGTTGC TCGCTAAGCT CATGTTAAAG CCGAACAACC TATTGATACT CGATGAACCC
ACCAATGACT TGGACGTGGA AACACTGGAG TTACTTGAAG ACATCTTAGG CAACTATAAA
GGCACGCTTA TTTTGGTGAG CCACGATAGA GAGTTCGTTG ACAATGTAGT GACCTCTAGT
TTGTTTTTCG AAGGTGAGGG CAAGATCAAA GAGTTTGTTG GTGGTTATGC CGATATTTAT
CAATGGTATG CCGCCAATGC GGTCGCTAAA AAAGGAAATA AGGCTGAAAC TTCTAAGCAA
AGTGAGAGTC CTAAAACCAA GCCGAAAACC GTTCCTAGTA AAAAGCTATC GTATAAGCAG
CAATTAGAAC TCGAAAAATT ACCGGTTTCT ATCGATAAAC TAGAGCGAGA GATAACGCAG
TTACAGTCGC TCATTAGCGA TGGAGATTTT TTCAAGCAAG ATAACGATTC TACATCTAAA
ACATTGGCAC AACTTGCTGA TGCTGAAAGT AGCCTCAGTG AGGCATACGC TAGATGGGAC
GAACTTGAAG CATTAACTGA ATAA
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| Protein sequence | MAFRRTTIKR VFVLSLLQLK NASIIFGHPP LLSGVELVIQ PGERVCLVGR NGCGKSTLLK
IIAGELKLDD GQRLVGNQVK ISRLPQDPPQ SVECSLFDYV AEGMAEVGEL LKAYFHQTHV
IATDYSEAQM DKLEKLQQQL DHHNAWQFEQ KIMQVLTQLK LDPDQQLSSL SGGWRRKAAL
ARALANQPDI LLLDEPTNHL DISMIKWLEN TVLDYQGAVV FVSHDRAFIR NVATRIVDLD
RGQLVSYPGN YQEYLDKKAH DLEVEETQNA LFDKKLSQEE AWIRQGVKAR RTRNEGRVRA
LKALRNERSE RRDVQGRAVV TLGQGQNSGK IIFEAENLSY KIEDKNIVDH LDFTVFRGDK
IALIGPNGCG KSTLIKLLLE QLEPSSGTVR CGTKIDLAYF DQHRSQLDVS LKVIDAIADG
KREVDINGNS KHVISYLQDY LFTPERVNVP VSSLSGGEKN RLLLAKLMLK PNNLLILDEP
TNDLDVETLE LLEDILGNYK GTLILVSHDR EFVDNVVTSS LFFEGEGKIK EFVGGYADIY
QWYAANAVAK KGNKAETSKQ SESPKTKPKT VPSKKLSYKQ QLELEKLPVS IDKLEREITQ
LQSLISDGDF FKQDNDSTSK TLAQLADAES SLSEAYARWD ELEALTE
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