Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1989 |
Symbol | |
ID | 4172124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2419975 |
End bp | 2420442 |
Gene Length | 468 bp |
Protein Length | 155 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054997 |
Product | cytochrome c, class II |
Protein accession | YP_661561 |
Protein GI | 109898306 |
COG category | [C] Energy production and conversion |
COG ID | [COG3909] Cytochrome c556 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.13994 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT TATTAGTAAG TGCAATAGCC AGTACCATGT TACTAACCGC TGGAGTGTCA GCGCAAGAAG CCAGCTCTGA AAAACAAGCC AAAAGTGCGG CCCAATTTCG CCAAGCATTG TTGCAGCTCG TGCGCAGTAA TGTAGGTGCT TTAGGCGCTA TGGCGAAGGG CGCTATCCCT ATGGATACGC AAACTATAGA GACGAATGCC ACCCGCTTAG AGCAATTGTC TTTGATGATG GACGACTATT TTGCCTTAGA TACGTCTAGT TTTGATATTG AAACAGAAGC GTTACCGAAA ATTTGGCAAG ACCGCGCAGA TTTTGCTACT AAGGTAGACG CATTAACTGA CGCTTCTCAA GGCCTAAAAT CAGCTGCCAT GAAAGGCGAT GAGAGTGCAT ACAAAGCGGC TATCGGCAGT GTGTTAAAGA GTTGTAAAGG ATGTCACGAC AGCTACAAAG CTGAATAA
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Protein sequence | MKKLLVSAIA STMLLTAGVS AQEASSEKQA KSAAQFRQAL LQLVRSNVGA LGAMAKGAIP MDTQTIETNA TRLEQLSLMM DDYFALDTSS FDIETEALPK IWQDRADFAT KVDALTDASQ GLKSAAMKGD ESAYKAAIGS VLKSCKGCHD SYKAE
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