| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1979 |
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| Symbol | |
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| ID | 4172114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2403704 |
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| End bp | 2404999 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638054987 |
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| Product | citrate transporter |
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| Protein accession | YP_661551 |
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| Protein GI | 109898296 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.789189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCAGTT TAATTGGTTT GATAGGCGGG TTGTTGCTGC TAATAGTGCT CACTATTCGT
GGCATGAACT TGTTTATCGC CGCCCCCTTG TGCGCACTTA TTGTCGCGCT TACCAGTGGT
ATCCCGATTT TTATCGGCGA TGTTAATTTT GTCAGTAGCT ATATGCAGGG TTTCTCTGGA
TTTATTGCTT CTTGGTTTTT CATGTTTTTG CTTGGCTCCT TGTTTGGTAA ATTCATGGAA
GACACAGGCG CTGCCGACGC AGTAGCACGC TTCATCATAG CAAGATTGGG CCGCAGCCAA
GCGGTTGCGG CGGTAGTGCT CGCCTGCGCT ATTTTGACCT ACGGCGGGGT TAGCCTCTTC
GTTGTGGCGT TTTCGGTTTA TCCTATGGCG TTGAGCTTAT TCAAAGATGC CAACTTGCCC
AGACGCTTTA TTCCCGCTGC ATTGGCATTT GGTTCAGTCA CCTTTACCAT GACATCCGCT
GGCTCCCCAG AAATTCAAAA TTGGATCCCC ATTAAATACT TGGGTACCTC ACCTTTTGCC
GCGTGGGAAG TAAGCTTAGT AGTGGCGATT TTCATGGCGG TTTTTGGTTT CTGGTGGATG
CGCCGGATGA TCAACAAAGC ATTAGCGAAC GGCGAAAAAT TTGAACACTG GGAACAAGAT
CCTCAAATCA CAGACCGGGC GCTTCCTAGC CCCATAACTG GGTTAATTCC ACTGTTAGTG
GTGCTCGTAC TTTCCTTTTT GCTCCACGAT AGCCTAGGTC ATTTAGCCTT GATCATTGCG
CTGGGTGGCG GTGTGCTCAC CCTGATGATC ATCAACTACC GTTATTTTAT GAATATGCAA
AATGCCATCA CCGCTGGCAC TACAGGTGCT TTGGTCGCCA TTGGTAACAC CGCAGCGGTG
GTGGGGTTTG GCAGTATCGC TAAAGCTACC GAGGCGTTTC AGGTCGCCGT AGAAGTCATG
ACCCATATAC CGGGAAATGA GTTAATTGGC GCAGCAATTG CCATCAGTGT TATAGCCGGT
TTAACAGGCT CGGCTTCAGG CGGGCAAGTT ATCGCCCTGC CCTTACTCGC GCCGCATTAC
ATCGACCAAG GTGTGAACCC TGAAGAGCTA CATCGGGTTG TATCTATTTC ATCAGGTGCG
TTAGATTCTC TGCCACACAA TGGTTATGTG GTGACATTAA TCCGGGCAAT TTGTAATGAG
ACTCACCAAC GGTCATATTG GTCAGTCGGC GCACTAACGG TTGTGGTGCC ATTATGTGGT
CTTGTGTTGG CTATCGCCTT ATTTAACCTA TTTTAG
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| Protein sequence | MLSLIGLIGG LLLLIVLTIR GMNLFIAAPL CALIVALTSG IPIFIGDVNF VSSYMQGFSG
FIASWFFMFL LGSLFGKFME DTGAADAVAR FIIARLGRSQ AVAAVVLACA ILTYGGVSLF
VVAFSVYPMA LSLFKDANLP RRFIPAALAF GSVTFTMTSA GSPEIQNWIP IKYLGTSPFA
AWEVSLVVAI FMAVFGFWWM RRMINKALAN GEKFEHWEQD PQITDRALPS PITGLIPLLV
VLVLSFLLHD SLGHLALIIA LGGGVLTLMI INYRYFMNMQ NAITAGTTGA LVAIGNTAAV
VGFGSIAKAT EAFQVAVEVM THIPGNELIG AAIAISVIAG LTGSASGGQV IALPLLAPHY
IDQGVNPEEL HRVVSISSGA LDSLPHNGYV VTLIRAICNE THQRSYWSVG ALTVVVPLCG
LVLAIALFNL F
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