| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1888 |
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| Symbol | cysS |
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| ID | 4172733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2283211 |
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| End bp | 2284605 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638054897 |
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| Product | cysteinyl-tRNA synthetase |
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| Protein accession | YP_661462 |
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| Protein GI | 109898207 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0215] Cysteinyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00435] cysteinyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.298729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTACACA TATACAATAC CCTGACTCGA CAAAAAGAGC TCTTTACACC TTTACATGAA
TCAAAGGTGG GGTTGTACGT GTGCGGTATC ACAGTGTATG ACCTGTCGCA CATGGGGCAC
GCACGCACGT ACTTGAGTTT TGATTTAATG GTGCGCTACT TACGCCACAA AGGCTATGAG
GTGAATTATG TGCGAAACAT CACGGATATT GATGACAAAA TCATTCAACG TGCGAATGAA
AATGGCGAAA CGACCAGTGA ACTAACTGAG CGCACTATCG CCATGATGCA CGACGATTTC
GCCGCGATAG GCTTGCTTGC CCCAGACATT GAACCCCGCG TGACGACCCA CATGCCTGAA
ATTATCGCGA TTATCGAGCG CCTCATTCAG CGCGGCCACG CTTATCAGGC TAAATCAGGG
GATGTGTTAT TTGATGTGAG CAGCTATGCG GATTACGGCA AACTAAGTAA ACAAGACCTA
GACCAATTGA ACATGGGCTC GCGCGTTGAT GTTGACAGCG ACAAAGACGA CCCTATGGAT
TTCGTTTTAT GGAAAACCGC AAAGCCTGGT GAGCCAAGTT GGCAATCCCC ATGGGGAGAC
GGACGCCCTG GCTGGCATAT TGAGTGTTCA GCCATGAATC AAAAACATTT GGGTGAGCAC
TTCGATATTC ACGGCGGTGG CTCTGATTTG ATTTTCCCTC ATCATGAAAA TGAAGTGGCG
CAATCATGCT GCGCTTATGA CACCCCGTAC GTAAATTATT GGGTGCATGC GGGTATGGTG
CAAGTCGACA GTGAGAAAAT GTCTAAATCG TTAGGCAACT TCTTCACATT AAGGGATGTG
TTACAGCAAC ATGATGCTGA AACATTGCGT TATTTCTTGA TGTCAGCTCA CTATCGAAGT
CAATTGAGTT ATTCACAAAG TAATATTACC CAAGCGCGCA GTGCACTTGA GCGCTTGTAT
ACGTCTCTTC GGGACGTAAA AGCAAATACC CAAGTCGATA TGCACAGTGC TGATTACCTC
ACTCGCTTTG ATAAAGCCAT GGATGATGAC TTCAACACAC CTGAGGCCAT GGCAGTGTTG
TTTGACGTAG CCAAAGAGCT CAACCGAGCC AAAGCTGAAG GGCAAGAAGG GCATGAGCGA
GCCAGTGATT TGGCCGGCGT GCTGATTAAT TTAGGCAAGG TGCTAGGCAT TTTACAACGC
AGCCCAAGTG AATATTTGCA AGGCGAGCAG CAAGATGATG ATGAAGTGGC AGAAATCGAA
GGGTTAATCA AAGCGCGTAA CGATGCCCGC GCCGCTAAAG ACTGGGCCGC AGCCGATGCC
GCGCGAGATG GTTTAAATGC CCTCAATATT ATTCTTGAAG ATGGCCCCAG CGGCACAACG
TGGCGCAAGG GTTAG
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| Protein sequence | MLHIYNTLTR QKELFTPLHE SKVGLYVCGI TVYDLSHMGH ARTYLSFDLM VRYLRHKGYE
VNYVRNITDI DDKIIQRANE NGETTSELTE RTIAMMHDDF AAIGLLAPDI EPRVTTHMPE
IIAIIERLIQ RGHAYQAKSG DVLFDVSSYA DYGKLSKQDL DQLNMGSRVD VDSDKDDPMD
FVLWKTAKPG EPSWQSPWGD GRPGWHIECS AMNQKHLGEH FDIHGGGSDL IFPHHENEVA
QSCCAYDTPY VNYWVHAGMV QVDSEKMSKS LGNFFTLRDV LQQHDAETLR YFLMSAHYRS
QLSYSQSNIT QARSALERLY TSLRDVKANT QVDMHSADYL TRFDKAMDDD FNTPEAMAVL
FDVAKELNRA KAEGQEGHER ASDLAGVLIN LGKVLGILQR SPSEYLQGEQ QDDDEVAEIE
GLIKARNDAR AAKDWAAADA ARDGLNALNI ILEDGPSGTT WRKG
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