Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1887 |
Symbol | |
ID | 4172732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2282531 |
End bp | 2283025 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054896 |
Product | peptidylprolyl isomerase |
Protein accession | YP_661461 |
Protein GI | 109898206 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.033012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTCACAA TTCATACTAA CTACGGCGTC ATTAACGTAG AGCTTTTCGC AGACAAAGCG CCTGAGACAG TTGCTAACTT TTTGAGTTAT GCCAAAGAAG GGTTTTACGA CAACACAATC TTTCACCGTG TTATCGATGG TTTCATGGTA CAAGGCGGTG GCTTCGAGCC CGGCATGGAG CAAAAAGCAA CTAAAGCGAC CATTAAAAAT GAAGCTAACA ATGGCCTTGC CAACGAAGTA GGCACATTGG CTATGGCACG TACAAATGAG CCGCATTCTG CTAGCTCACA GTTTTTCATC AACGTGGCTA ACAACAGCTT CTTGAACTTC CGCAGCGAAT CTGGCGATGG CTGGGGTTAC TGCGTATTTG CTAAAGTGAC TGACGGCATG GACGTGGTCA ACAAGATCAA AGACGTTAAA ACGGGCAACT CTGGTTATCA CCAAGATGTG CCTGTAGAAG ATGTGGTTAT TCAGAAAGTT GAAGTTAGCG AATAA
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Protein sequence | MVTIHTNYGV INVELFADKA PETVANFLSY AKEGFYDNTI FHRVIDGFMV QGGGFEPGME QKATKATIKN EANNGLANEV GTLAMARTNE PHSASSQFFI NVANNSFLNF RSESGDGWGY CVFAKVTDGM DVVNKIKDVK TGNSGYHQDV PVEDVVIQKV EVSE
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