| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1886 |
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| Symbol | |
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| ID | 4172731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2281737 |
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| End bp | 2282477 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054895 |
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| Product | UDP-2,3-diacylglucosamine hydrolase |
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| Protein accession | YP_661460 |
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| Protein GI | 109898205 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2908] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01854] UDP-2,3-diacylglucosamine hydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0836834 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCTTTTA CCTACTTTAT TGCCGATTTA CATCTATCTG CTGAGCGCGA AGATATTAGC
CACTGTTTAT TTCAGTTTCT TGCGCACGAC GCACGACAAG CAGATGCACT TTATGTGTTA
GGCGATTTGT TTGAAGCTTG GATTGGCGAT GACAATCAAA CCCCATTCAA TCAGCAGGTC
GCCAGCGCGT TCAAGCAGGT GGCAGAGGCT GGAGTAGAGG TCTTTTTTAT TCATGGCAAT
CGCGATTTCT TGATCCGCGA ACGCTTCGCG AAACAAGCTG GCTTTACCTT ATTGCCAGAA
CAAGTAGTGA TTGATTTATA CGGCACACCC ACCTTGATCA CCCATGGTGA TGAACTGTGC
ACAAAAGACG TGGCCTATCA AAAATTCCGT AAAAAAGCCC GTGGTTGGTG GTGGCCAAGG
TTAGTCTTGT GCTTACCCTT GAAAACACGG CAAAAAATTG CTGATAACGG CCGAGCAGCC
AGTAAAGAAA ACCAAAAGCA GCTCACCAAT GACATCATGG ATGTGACGGA GCAAGAAGTG
ATCGACACTA TGGCGCGCTA TAATGTACAA CGCTTAATAC ATGGGCATAC TCATCGCCCA
GCCATTCACG AACTGACTGT CAACGGCCAA CCAGCCAAGC GCATCGTCTT AGGCGATTGG
TACGATCAAG GCAGTATTTT GAAAGTGACA AAAGACTCGC TCTCGTTAAC GGCACATCCC
TTCTTTACGC CTAAAGCGTA A
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| Protein sequence | MSFTYFIADL HLSAEREDIS HCLFQFLAHD ARQADALYVL GDLFEAWIGD DNQTPFNQQV
ASAFKQVAEA GVEVFFIHGN RDFLIRERFA KQAGFTLLPE QVVIDLYGTP TLITHGDELC
TKDVAYQKFR KKARGWWWPR LVLCLPLKTR QKIADNGRAA SKENQKQLTN DIMDVTEQEV
IDTMARYNVQ RLIHGHTHRP AIHELTVNGQ PAKRIVLGDW YDQGSILKVT KDSLSLTAHP
FFTPKA
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