| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1879 |
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| Symbol | asnC |
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| ID | 4173064 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2273919 |
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| End bp | 2275316 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054888 |
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| Product | asparaginyl-tRNA synthetase |
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| Protein accession | YP_661453 |
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| Protein GI | 109898198 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
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| TIGRFAM ID | [TIGR00457] asparaginyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGCAAG CCCCAGTGGC AGATATTTTT GCCGGTAAAT ATTCAGTAGG TCAGCAGGTC
ACCGTAAAAG GTTGGGTGAG AACCCGCCGT GACTCGAAAG CTGGTTTATC CTTCGTTGCT
TTGCATGACG GAAGTTGCTT TGACCCTATT CAGGTCATCG CCCTGAATAC CCTGAATAAT
TATGCCGACA TTCAACGGTT AACCACTAGC TGCTCCATCA TCGCCACTGG CGTGCTTAAG
GAATCGCAAG GCCAAGGCCA ATCGCTTGAA ATAGAAGCCG ATGAGATTGA AATCGTTGGC
TGGGTAGAAA ACCCAGATAC CTACCCTATG GCCCCGAAGC GCCATAGTTT AGAATACCTT
CGCGAACACG CTCATTTGCG CCCAAGAACA AACGTGATTG GCGCAGTGAC CCGTGTACGA
AACTGTTTGT CTCAAGCAAT TCATCGCTTT TTCCATGAAA ACGGTTATTG CTGGGTGAGC
ACACCTATCT TAACCGCCAG CGATACCGAA GGCGCAGGCG AAATGTTTCG CGTGTCTACT
CTAGACATGA TGAATGTACC AACAACCGAA CAAGGTCAAG TTGATTTCAG CCAAGACTTC
TTTGGGAAAG AAACCTTCCT AACGGTATCA GGGCAATTAA ACGGTGAGAC ATACGCGACA
GCGATGTCAA AAATCTATAC GTTTGGTCCA ACGTTTCGTG CAGAAAATTC AAACACCAGC
CGTCACTTAG CTGAATTTTG GATGATTGAG CCTGAAGTGG CGTTTGCCGA TCTGAGCGAT
ATCGCTCAAT TGTCTGAAGA TTTGCTTAAA TACGTGTTTA AAGCAGTACT GGCTGAACGC
GCTGATGACA TGGCCTTCTT CGCACAGCGG ATCAACAAGG ATGCGATAAC GCGGTTAGAA
AAAGTCATAG AGCAAGACTT CGTGCGCATG GACTACACCG ACGCCATTGA GATTTTGCAA
AATTGTGGCA AGAAGTTCGA GTTCCCAGTT TCCTGGGGCG TTGACTTGTC GTCAGAGCAC
GAGCGCTATT TGGCAGAAGA GCATGTAGGC GCGCCAATTA TCATGCAGAA CTATCCAAAA
GACATAAAAG CGTTTTATAT GCGTATTAAC GACGACAATA AAACCGTTGC CGCTATGGAT
GTACTCGCTC CCGGGATCGG TGAGATCATT GGTGGTTCAC AACGTGAAGA ACGCCTTGAC
GTATTTGATC GTCGCTTAGC TGAAATGGGA TTAGATCAAG AAGATTACAG TTGGTACCGC
GATTTACGTC GCTATGGCAC AGTGCCTCAC TCTGGTTTTG GTCTCGGTTT CGAACGGTTA
GTTGCTTATG TCACTGGCAT GCAAAACGTC CGAGACGTAA TTGCTTTCCC ACGTACACCG
GGTAATGCAA ACTACTAA
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| Protein sequence | MAQAPVADIF AGKYSVGQQV TVKGWVRTRR DSKAGLSFVA LHDGSCFDPI QVIALNTLNN
YADIQRLTTS CSIIATGVLK ESQGQGQSLE IEADEIEIVG WVENPDTYPM APKRHSLEYL
REHAHLRPRT NVIGAVTRVR NCLSQAIHRF FHENGYCWVS TPILTASDTE GAGEMFRVST
LDMMNVPTTE QGQVDFSQDF FGKETFLTVS GQLNGETYAT AMSKIYTFGP TFRAENSNTS
RHLAEFWMIE PEVAFADLSD IAQLSEDLLK YVFKAVLAER ADDMAFFAQR INKDAITRLE
KVIEQDFVRM DYTDAIEILQ NCGKKFEFPV SWGVDLSSEH ERYLAEEHVG APIIMQNYPK
DIKAFYMRIN DDNKTVAAMD VLAPGIGEII GGSQREERLD VFDRRLAEMG LDQEDYSWYR
DLRRYGTVPH SGFGLGFERL VAYVTGMQNV RDVIAFPRTP GNANY
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