Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1873 |
Symbol | |
ID | 4173058 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2266877 |
End bp | 2268955 |
Gene Length | 2079 bp |
Protein Length | 692 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638054882 |
Product | FMN-binding |
Protein accession | YP_661447 |
Protein GI | 109898192 |
COG category | [K] Transcription |
COG ID | [COG3901] Regulator of nitric oxide reductase transcription |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTTTAT CTTACCAACT GAATTACCTA GCCTTGATTA TTGGCACATT GTTGACCCTT TTTTCATTGG TCAGTCACGC CGATACTGTT CCGGCGAACA TCGCACATAT ATTTCCAAGC GCAACCCGGA TCGAGGCCCC CCTTGAGGAT GTTGCTGTTA CGCCTGTATA CCAATTGAAC GAGTTACTTG GCTATACCTT TGAATCTGAC GATTTCACAC AATTCATTGG TTTTTCGGGG CAAACAATCA ACCTTCTCAT CGGTTTGGAT ACCAAAGGTA TCATCACTGG TATTAAGGTC CTTAATCATA ATGAACCGAT TTTTTTGCAT GGCCTAGGCG AAGAAGCCAT GTTCAGTTTT ATCGCACAAT ACCCTGGGCA CTCAATCAAA GAACGTTTCA TCATCAATAG CCGTGAACAA CACTCGGCTG ATAATACCTA CTTTGATGGC GTGACCCGAG CGACAATTTC CGTTCTTGTT ATCAATGACA CCATCATCGC ATCGGCGCTT AAAGTCGCTA GGCAAAAACT TGACGGATTT CTAGCGGCGC ATCCTCATCA AATTAAGCAA GATTTCTATC ATCCATTGAC CTTTAAACAA CTGCTCGAAA AAAAGTATAT CCATCATTGG GTGGTAAGCA CCAAAGAGGC AATGAACATT TCCCCCAAGT TAGCGCAGAA AGTGAAACGC TTAGCGGATG GCCACGATGA CTTTATTGAT ATCTACGTGG CGTTCGTCAA CATCCCTATG ATTGGCAGAA ACCTGTTGGG CGACCAAGAA TATAAGCGAC TTATAGAAGA GCTGTCGCCC GGCGAGCACG CGTTAATGCT ATTCAATAAA GGACAATACT CCTTTATCAG TGAAGAGTTT ATTCCCCAAA CAACCTCGAG CCGGTTAAAC GCTGAGCAAG GTGGGTTTCC GGTAGACGTT CGAGATATAG ATTTTTACAG CTTCTACCCA CCAAGCTTTG CTATGCAGTT ACCAAAGTTT GATGATCAGC GTGTGTTCCG CATTAAATCT CAATCTGGAT TTGATATAAG CCAACCATTC AATTTGAACT TATCAGTAAG CTATCACTCG TCCTTCTTGA ATCAACAAGA GCATGCATTT CCTTTTACGA TCACCCCAAA CCCAGACTTG TTTGAAGAAA CACCTGATGC TTTAAGTCAA GTCAGTCAGC GTCCATTATG GCAGAAAATA TGGTTAGATC GCCCGGTGCA AATTGGTCTC ACCCTGCTCT ATCTACTGTT CGTTTTATGG GTGTTCGTCA CGCAACACTC CCTAGCGAAA AGCCAAACCA AAGTACATCG ACTGCGTTTT GCCAGTTTAA TATTTGTATT ATTTTTTGTC GGTTTCTACG CCCAAGGCCA ACTCTCCGTG GTGAATATAT ACACCCTACT CCTTGCCCTA GGAAGCGACT TTAATATTAC GGTTTTCCTG CTCGACCCGG TTATTTTTAT CTTATGGGTG TTTGTGTTTG TAACCCTATT TTTATGGGGT CGGGGGGTGT TTTGCGGCTG GCTATGCCCT TTTGGCGCAC TGCAAGAATT TATGGGCATG CTGGCAATTA GGCTGCGTAT TCGCCAACTA AAAATTTCAC CGAGACATCA CAAGTTTGCC CAAAAGATAA AATACTTAGT GCTTCTCGGG CTAGTGGCAT GTTCATTCTA TTCCCTGACA TTGGCAGAAA AGCTAGCCGA AATTGAGCCA TTTAAAACAT CAATTACATT GAATTTCGTG CGCTACTGGC CTTTCGTTCT TTATGCTCTG GTATTGCTGG CTCTGAGTTT AAAGATTCAC AAAGTGTACT GTCGCTATTT ATGCCCATTA GGTGCTGGCT TAGCAGTACT AGGACGTTAC CCGTTGTTTA AGTGGCTAAC GCGCCGCAAA GAATGTGGTA GCCCTTGTCA GCTTTGTCGC AATAAAAAAT GTGCGATCGA CGCCATAAGA CCCACTGGTA ACATTGATTA TAATGAATGT ATTCAATGCC TTGAGTGTCT TGTTACCATT GAGAGTCCGC AACTATGTGT GGTGGACAAA TACAATAAAA AATCAATAAG AGTACGAGAA GTAAAATAA
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Protein sequence | MRLSYQLNYL ALIIGTLLTL FSLVSHADTV PANIAHIFPS ATRIEAPLED VAVTPVYQLN ELLGYTFESD DFTQFIGFSG QTINLLIGLD TKGIITGIKV LNHNEPIFLH GLGEEAMFSF IAQYPGHSIK ERFIINSREQ HSADNTYFDG VTRATISVLV INDTIIASAL KVARQKLDGF LAAHPHQIKQ DFYHPLTFKQ LLEKKYIHHW VVSTKEAMNI SPKLAQKVKR LADGHDDFID IYVAFVNIPM IGRNLLGDQE YKRLIEELSP GEHALMLFNK GQYSFISEEF IPQTTSSRLN AEQGGFPVDV RDIDFYSFYP PSFAMQLPKF DDQRVFRIKS QSGFDISQPF NLNLSVSYHS SFLNQQEHAF PFTITPNPDL FEETPDALSQ VSQRPLWQKI WLDRPVQIGL TLLYLLFVLW VFVTQHSLAK SQTKVHRLRF ASLIFVLFFV GFYAQGQLSV VNIYTLLLAL GSDFNITVFL LDPVIFILWV FVFVTLFLWG RGVFCGWLCP FGALQEFMGM LAIRLRIRQL KISPRHHKFA QKIKYLVLLG LVACSFYSLT LAEKLAEIEP FKTSITLNFV RYWPFVLYAL VLLALSLKIH KVYCRYLCPL GAGLAVLGRY PLFKWLTRRK ECGSPCQLCR NKKCAIDAIR PTGNIDYNEC IQCLECLVTI ESPQLCVVDK YNKKSIRVRE VK
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