| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1834 |
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| Symbol | |
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| ID | 4173019 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2207902 |
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| End bp | 2209323 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054843 |
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| Product | MiaB-like tRNA modifying enzyme YliG |
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| Protein accession | YP_661408 |
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| Protein GI | 109898153 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.044841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGTTG AAACCTTTAA TCCAAAACAA ACTACGACCT TAGAAACACC GATAAAAACT
ATCGAAGCTG ATAAGCCAAG TACTTTATCC ACCGGTTCGC GGATTGGTTT TGTCAGCCTA
GGCTGCCCGA AAAACCTAGT GGATTCAGAG CGTATCTTGA CTCAGTTACG CACAGAAGGG
TATGACGTGG TCAACACCTA TAACGATGCG GATTTAGTCA TTGTAAATAC CTGTGGTTTT
ATTGATACCG CCGTACAAGA ATCGCTGGAT ACCATAGGCG AAGCACTGGC TGAAAATGGC
AAAGTTATCG TCACCGGTTG CTTAGGCATC AAAGAAGATG AAATACGCGA GGTGCATCCC
AACGTATTGG CCATTACCGG CCCTCATGCG TATGAAGAAG TGGTAAATCA GGTACATGAG
CATTTGCCTC AGCCAAGTTA TAACCCGTAT ATGAATTTAG TGCCGGATAT TGGCGTTAAG
CTGACGCCGC GCCATTATGC TTATTTGAAA ATATCTGAAG GCTGTAACCA CAGATGCACC
TTTTGCATTA TTCCTTCCAT GCGCGGCGAT TTGGTTAGCC GCCCTATTGG TGAGATTTTA
GATGAAGCCC AGCGCTTAAA AAACGCTGGG GTCAAAGAGC TATTGGTTAT TTCACAAGAC
ACCAGCGCTT ATGGCGTAGA CGTTAAAAAC AAAATGGGCT TCTGGAATGG TATGCCGGTA
AAAACAGGCA TGACAGAGCT GTGCGAAAAG CTCGGTGAGA TGGGCATGTG GGTACGATTG
CATTACGTTT ACCCCTATCC ATCTGTTGAT AAAGTCATGC CGTTAATGGC CTCGGGTAAA
GTGTTGCCTT ACCTAGATAT TCCCTTTCAG CATGCCAGCC CGCGTATTCT TAAATTGATG
AAGCGCCCCG CCGCCGCTGA GCGCACGATG GAGCGTATTA AGAAATGGCG CGAACTGTGC
CCAGAGTTAG TTATCCGCTC TACCTTTATT GTGGGCTTTC CAGGTGAAAC CGAAGAAGAC
TTCCAAATGC TGCTCGACTT TTTAGACGAT GCTCAGCTTG AGCGCGTGGG CTGCTTTAAA
TACTCAGATG TTGAAGGCGC GAAAGCGAAC GACTTGCCGG ACCCGGTCAG TGAAGAAGTC
AAACAAGAGC GTTTCGAGCG CTTTATGCAG AAACAGCAAC AAATCAGCAG CGCGAAATTA
CAGCGTAGAA TTGGTTCAAC CATTCAAGTG CTCATCGATG AAGTAGACGA AGAAGGCGCC
ATTGGACGCA GTTTCGCTGA TGCACCTGAA ATCGACGGCC TTGTATACTT GAACGGTGAT
GTTGAACTGA AACCTGGCGA CATAATTACC GCCACAGTTG AACACGCTGA TGAATACGAC
CTATGGGCCT CGCGTACTAT AAACTGTGAC TTGAGTGCTT AA
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| Protein sequence | MTVETFNPKQ TTTLETPIKT IEADKPSTLS TGSRIGFVSL GCPKNLVDSE RILTQLRTEG
YDVVNTYNDA DLVIVNTCGF IDTAVQESLD TIGEALAENG KVIVTGCLGI KEDEIREVHP
NVLAITGPHA YEEVVNQVHE HLPQPSYNPY MNLVPDIGVK LTPRHYAYLK ISEGCNHRCT
FCIIPSMRGD LVSRPIGEIL DEAQRLKNAG VKELLVISQD TSAYGVDVKN KMGFWNGMPV
KTGMTELCEK LGEMGMWVRL HYVYPYPSVD KVMPLMASGK VLPYLDIPFQ HASPRILKLM
KRPAAAERTM ERIKKWRELC PELVIRSTFI VGFPGETEED FQMLLDFLDD AQLERVGCFK
YSDVEGAKAN DLPDPVSEEV KQERFERFMQ KQQQISSAKL QRRIGSTIQV LIDEVDEEGA
IGRSFADAPE IDGLVYLNGD VELKPGDIIT ATVEHADEYD LWASRTINCD LSA
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