| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1824 |
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| Symbol | |
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| ID | 4172072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2193807 |
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| End bp | 2195054 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638054833 |
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| Product | major facilitator transporter |
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| Protein accession | YP_661398 |
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| Protein GI | 109898143 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0738] Fucose permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.582867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGAA TGCTGACCAT TATTGCTATC TCACTGTGCT ATTTCGTGTT TGCTGTTCTG
CTCAACAGTG TGGGCACGGT GATCTTACAG TCGATCACCA GTTTTGATGT CAGCAAAACT
GACGCTAGTA CATTAGAAGG TTTTAAGGAC TTGTCTATTG CCTTTGTGTC GTTTTTTGTT
GCGTCATTTA TTCCTCGCAT AGGATATCAA GTTGCACTTT GTTTGGGTTT AGTACTGGTC
GCTGTGGTGT GTTTACTGAC CCCGCTTTTT GCCGAGTTCT TTTTTATTAA GATACTGTTT
GCCGTTATCG GTACCGCGTT CGCCTTGGTC AAAATATCTG TGTATTCATT GATAGGGCAG
CTCAGTGACA ATACAGAGAG TCACTCATCA CTGATGAACA CGGTAGAAGG TATTTTTATG
GTCGGCGTGC TCTCTGGCTA TTGGGTTTTC AGTGGGTTCA TTAACGCTGA TGATCCTGCT
TCCCTTGAGT GGTTGAACGT GTATTACCTA TTAGGTGGCT TGATTAGCTT AGCCGCCATA
TTTGTGTATT TCGCACCGAT TGAGCGTGAA CCTTTTAAGG CAAATCAAGA CAATGCACTA
AGTGAGTTTG TTGACATGCT CAAGCTAACG TATCAACCAT TGGTGCTCAT TTTCGTTATT
TCAGTATTCC TTTACGTATT GATAGAGCAG GGGATTGGCT CGTGGCTACC CACGTTTAAT
CGTGAAGTGT TGGGCTTACC CGTAGACATC AGTATTCAAT TGACCAGTAT CTTTGCGGCC
ATGATTGCGC TTGGTCGTTT GTTGGCTGGT TTTTTGTTGC GATTTGTCCC TTGGTACGTG
TTTATTAATG CCTGTTTGGT CATGATGTTT CTAACCATAC TGCTGACCTT ACCCATGACA
CAAGTTGCTG AAGGCCAAGT GGTCACGGGC ATTTTTGACG CACCGCTTGC AGCTTATTTA
CTGCCTGCAA TTGGCTTATT TATGGCGCCG ATTTATCCGC TTATTAACTC AGTAGTACTC
AGTGCATTAC CCAATAAACA GCACGCAAAA ATGACAGGGT TGATCGTTAT TTTCTCCGCG
CTAGGGGGAA CGTTTGGCTC GATCCTCACG GGAGTCGTTT TCGACAAGTT TGGCGGACAA
CACGCCTTTT ACATGTCACT TATTCCTATT ATGATGATCA TGCTGAGTTT GTATATTTTT
AGAAAACTTT CCGTGAACAA TCGTTCTGTG TCAGTTGAAG GAGCGTAG
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| Protein sequence | MNRMLTIIAI SLCYFVFAVL LNSVGTVILQ SITSFDVSKT DASTLEGFKD LSIAFVSFFV
ASFIPRIGYQ VALCLGLVLV AVVCLLTPLF AEFFFIKILF AVIGTAFALV KISVYSLIGQ
LSDNTESHSS LMNTVEGIFM VGVLSGYWVF SGFINADDPA SLEWLNVYYL LGGLISLAAI
FVYFAPIERE PFKANQDNAL SEFVDMLKLT YQPLVLIFVI SVFLYVLIEQ GIGSWLPTFN
REVLGLPVDI SIQLTSIFAA MIALGRLLAG FLLRFVPWYV FINACLVMMF LTILLTLPMT
QVAEGQVVTG IFDAPLAAYL LPAIGLFMAP IYPLINSVVL SALPNKQHAK MTGLIVIFSA
LGGTFGSILT GVVFDKFGGQ HAFYMSLIPI MMIMLSLYIF RKLSVNNRSV SVEGA
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