Gene Patl_1818 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1818 
Symbol 
ID4172066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2184581 
End bp2186659 
Gene Length2079 bp 
Protein Length692 aa 
Translation table11 
GC content48% 
IMG OID638054828 
Productpeptidase S9, prolyl oligopeptidase active site region 
Protein accessionYP_661393 
Protein GI109898138 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0201758 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAATTAA TCAAAAAATC GATCGCGCTG GCGATGCTGG TTGGCCCATT GGCCATAACG 
GCCAGTAACG CCTTGGCTCA GACCACAGAA AACACCCTCA AACTGCAAGA TGTATTCACT
TTAGAATATG CCTCAGGCCT GGATATTACC AAGGATGGTG AAACCGTTTA TTTCGTGCGT
AACTACATGG ACATTCAAAA CGATAAAAAA CGTGGCAACA TCTGGAAGGT CGATAAAAAT
AACGTAATGA CTCCAGTGAC CAATGGCTTA CATGCTGATT TCAGCCCTAC CTTGTCACCT
GATGAAAGCA AGTTAGCTTA TATCTCGACC GCAAGCGGCT CAGCGCAAAT CCACATCAAA
TGGCTAAACA CCGGGCAAAC AGGTCAAATG ACCCATCTAA CGGGCTCTCC GTCTAATCTT
AGCTGGTCAC CCGACGGTAA AATGCTTGCC TTTAGTCAGT TTGTGAAAGG CACGCCTAAA
TCCCCCGTGA ATTTGTCAGG CAAACCGGAG GGTGCCAAGT GGGCGGACTC GGCTATTTTT
ATTGACGATT TATTTTATCG GGCAGACGGT GCGGGTTATA TCCCGGCAGG AAATAACCAA
ATTTTTGTAC TCTCAGCGGA TGGCGGCACC CCTCGGCAAC TCACCCAAGG TGAGTTTAAC
CACGGGGGCA GTATCAGTTG GAGCAGCGAT AGCAAAGCCA TTGTTTTCTC GGCAAATCGG
CACCCCGACA GTGATTTAGA GCTCACCGAT GACAACGTAT ATAAGGTGGA TGTAGCCAGT
GGCGAGATGC TGCAGCTAAC CGATCGTATT GGTCCAGATA ACAGCCCATT GGTCTCTCCT
GACGGCAAAT TGATTGCCTA TTTGGGATAC GATGAAAAGT ACACTAACTA CGAGAATACT
CAGCTTTACA TCATGGATGC TAATGGTGGC GTGAGTCGCT CCCTTACCTC TGAGTTCGAC
CGCTCGGTAG GCAGTATACA ATGGGCGAGC GATAGCAAAG GCGTGTACCT AAGTTATGAC
GATAGCGGCG AAACCTATGT GGCTTACCAG CCCTTACAAG GTGACCGAAA GATTGTTGCT
GACAAAGTTG GCGGCTTGGC GTTTGGGCGA CCTTACTCGG GCGGTGAGTT TGATGTAGCC
AACAATGGCA CCGTGGCGTT CACTTACTCA AACCCACAGC GCCCAGCTGA CATTGCTATC
AAAAAAGGTG ACAAGGCCAC GTTACTCACC CAATTAAATG AAGATGCCCT CGCCCATAAA
GACATAGCAA GCATCAAACC ATTGAGCCTT AAGTCGTCTT TTGACGAATT GCCTATTCAG
GCATGGGTTG CTTACCCGCC GGGGTTTGAA CAAGGCAAAA AAGAAGGCAA ACGCTACCCG
CTTATCTTAG AGATACACGG GGGGCCGGTC GCCAATTACG GGCCGCATTT TTCCACTGAA
ATTCAGCTAA TGGCAGCGCA AGGTTATGTA GTGGTATACG CAAACCCACG AGGCAGTGAT
AGCTACGGAA AAGACTTCGC GCAAACTATC GATAAAAACT ACCCAAGCCA GGATTACGAT
GATTTGATGT CCACGGTAGA TGCCGTGATT GCTCAAGGCG CAATCGATGA GAAAAACTTA
TTTGTGACAG GTGGCTCAGG TGGCGGTACC TTGACTGCGT GGATTGTGGG TCACACCGAG
CGTTTTACCG CAGCCGTTGT CGCTAAACCG GTAATAAACT GGTACAGCTT TGTATTAACG
TCTGATTTTT ACCCGTTTTT CTATAAGAAT TGGTTTGGTA AAAAGCCTTG GGAAGCGCAA
GACTTATACA TGAAGCACTC GCCTATCAGT TACGTAGGCA ACGTCACCAC CCCCACTATG
TTACTCACTG GTGAGTCAGA TCACCGCACG CCGATTTCGG AAACAGAGCA GTATTATCAA
GCGTTGAAAT TACAGGGCGT TGAATCAGCA ATGGTGCGTA TACCGGGCGC ATCACACGGA
ATTTACGCTA GGCCAAGTAA CTTAATGGCA AAGGTCGGCT ATATCCTTTG GTGGTTTGAT
GAGCATCGCA CAGATAAAGA CACACCTAAG AGCAAATAA
 
Protein sequence
MKLIKKSIAL AMLVGPLAIT ASNALAQTTE NTLKLQDVFT LEYASGLDIT KDGETVYFVR 
NYMDIQNDKK RGNIWKVDKN NVMTPVTNGL HADFSPTLSP DESKLAYIST ASGSAQIHIK
WLNTGQTGQM THLTGSPSNL SWSPDGKMLA FSQFVKGTPK SPVNLSGKPE GAKWADSAIF
IDDLFYRADG AGYIPAGNNQ IFVLSADGGT PRQLTQGEFN HGGSISWSSD SKAIVFSANR
HPDSDLELTD DNVYKVDVAS GEMLQLTDRI GPDNSPLVSP DGKLIAYLGY DEKYTNYENT
QLYIMDANGG VSRSLTSEFD RSVGSIQWAS DSKGVYLSYD DSGETYVAYQ PLQGDRKIVA
DKVGGLAFGR PYSGGEFDVA NNGTVAFTYS NPQRPADIAI KKGDKATLLT QLNEDALAHK
DIASIKPLSL KSSFDELPIQ AWVAYPPGFE QGKKEGKRYP LILEIHGGPV ANYGPHFSTE
IQLMAAQGYV VVYANPRGSD SYGKDFAQTI DKNYPSQDYD DLMSTVDAVI AQGAIDEKNL
FVTGGSGGGT LTAWIVGHTE RFTAAVVAKP VINWYSFVLT SDFYPFFYKN WFGKKPWEAQ
DLYMKHSPIS YVGNVTTPTM LLTGESDHRT PISETEQYYQ ALKLQGVESA MVRIPGASHG
IYARPSNLMA KVGYILWWFD EHRTDKDTPK SK