| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1802 |
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| Symbol | |
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| ID | 4172050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2163953 |
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| End bp | 2164825 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054812 |
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| Product | succinyl-CoA synthetase, alpha subunit |
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| Protein accession | YP_661377 |
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| Protein GI | 109898122 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
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| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.155061 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGTAC TAATCGACAA AAACACCAAG GTAATCTGTC AAGGTTTCAC TGGTGGACAA
GGTACTTTCC ACTCAGAACA AGCTATCGAA TACGGTACGC AAATGGTCGG TGGTGTTACG
CCTGGTAAAG GCGGCACAAC TCATCTTGGT TTGCCTGTTT TCAATACAGT ACGTGAAGCG
GTTCAAGAAA CAGGCGCTAC TGCGACTGTT ATCTATGTAC CAGCGCCTTT CTGTAAAGAC
TCTATCGTTG AAGCTGCAGA TGCAGGTATC GAATTGATCG TTTGTATCAC TGAAGGTATC
CCTACGCTTG ATATGCTTTA CGTTAAAGAA TACGTAAATC GTAAAGGCGT GCGTATGATC
GGTCCTAACT GCCCAGGTGT TATCACCCCA GGCGAGTGTA AGATTGGCAT CATGCCTGGT
CACATTCACA AGCCAGGTAA AGTCGGTATC GTTTCTCGCT CTGGTACGTT GACGTATGAA
GCTGTTAAGC AAACAACAGA TGAAGGTTTC GGCCAGTCTA CGTGTGTTGG TATCGGTGGC
GACCCTATCC CAGGCTCTAA CTTCATTGAC ATCCTACAGA TGTTCCAAGA CGATCCTAAG
ACTGAAGCAA TCGTAATGAT TGGTGAAATC GGCGGAACGG CTGAAGAAGA AGCAGCTGCA
TTCATCAAAG CTAACATCAC TAAACCTGTT GTTTCTTACA TTGCTGGTGT AACTGCTCCT
GCTGGTAAGC GCATGGGTCA TGCTGGTGCG ATTATCTCTG GTGGTAAAGG TACTGCTGAC
GACAAATTTA AAGCACTTGA AGATGCAGGC GTTAAGACTG TTCGCTCACT TGCTGACATT
GGTCAAGGTC TTCGCGAAAT TACCGGTTGG TAA
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| Protein sequence | MSVLIDKNTK VICQGFTGGQ GTFHSEQAIE YGTQMVGGVT PGKGGTTHLG LPVFNTVREA
VQETGATATV IYVPAPFCKD SIVEAADAGI ELIVCITEGI PTLDMLYVKE YVNRKGVRMI
GPNCPGVITP GECKIGIMPG HIHKPGKVGI VSRSGTLTYE AVKQTTDEGF GQSTCVGIGG
DPIPGSNFID ILQMFQDDPK TEAIVMIGEI GGTAEEEAAA FIKANITKPV VSYIAGVTAP
AGKRMGHAGA IISGGKGTAD DKFKALEDAG VKTVRSLADI GQGLREITGW
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