| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1795 |
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| Symbol | |
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| ID | 4172043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 2154956 |
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| End bp | 2155330 |
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| Gene Length | 375 bp |
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| Protein Length | 124 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638054805 |
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| Product | succinate dehydrogenase, cytochrome b subunit |
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| Protein accession | YP_661370 |
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| Protein GI | 109898115 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
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| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000214378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGAAAAAGC AGAGACCAGT TAATTTACAA TTAAACACAA TCAGTTTTCC CCCTGCAGCT
ATAACTTCTA TCCTTCATCG CATTACCGGC GTCGCAATGT TTTTTGCGTT GTTGTTTGTG
ATCTGGGCTT GGGCGGAATC TGTATCTTCT CCAGACGGTT TTGCATTTGT GCAAGAACAG
ATGTCGGGAG TTATCGGTAA AATAATCGCT ATCGCTACCA TTTCAGCGCT CACCTACCAC
ATTCTTGGCG GTCTGCGCCA TTTAGTGATG GACATGGGTT ACTGGGAAGA ACTTGAGTCA
GGGAATATCA GTGCGAAAAT CGTTATCGGT TTATGGATTG TTCTGACTGT CGTTGTAGGA
GTTTTATTAT GCTAA
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| Protein sequence | MKKQRPVNLQ LNTISFPPAA ITSILHRITG VAMFFALLFV IWAWAESVSS PDGFAFVQEQ
MSGVIGKIIA IATISALTYH ILGGLRHLVM DMGYWEELES GNISAKIVIG LWIVLTVVVG
VLLC
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