| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1770 |
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| Symbol | |
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| ID | 4172018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2124107 |
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| End bp | 2125366 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638054780 |
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| Product | putative glycosyltransferase |
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| Protein accession | YP_661345 |
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| Protein GI | 109898090 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAATTC AACATATTTT AGTTATAGGC TATGTTTGGC CAGAGCCTAA CTCTTCAGCT
GCAGGCCAAC ATATGATGAG CCTGCTGACA CTTTTCATGC AGCAAGGTTG GTCTGTTAGT
TTTGCGAGTC CGGCGGTTCA AGGTGAGCAT AAAATTAATC TCACTGAGTT TGGTATAAGC
GAACACAGCA TTGCCCTTAA CTGCAGCAGT TTTGATGACT TTATTTTGAA TCAAGCACCA
GATGTCGTGG TGTTCGACCG TTTTATGTTG GAAGAACAGT TCGGTTGGCG TGTTGCTAAG
CACTGCCCAA ATGCACTTCG CGTACTTGAT ACGGAAGATA TGCACAGTTT ACGTGATGCT
CGTCACCGTG CATTCAAGCA AGGCAGAGAC ATCACTGAAA GCGATCTTAA AAGCGATTTG
GCGTTACGTG AAATCGCATC CATATACCGC TGCGATCTCA GTTTAATCAT ATCGAGTTTC
GAATACACCC TGCTGCAAAA TACCTTTTGT GTGCCAGCAA ACCTGCTATA TCACTGCCCG
TTTATGCTTG ATATTGAAGA CATAACGCAA CGATATCCCA ACCTGTCTTT TTCGCAGCGC
CAGCACTTTG TCAGCATTGG TAATTTTCGC CACGAGCCAA ATTGGAACGC CGTACTGTGG
CTAAAATCCG AAATTTGGCC CTTGATACGA CAAGCGTTAC CCACTGCTGA GCTGCATATT
TACGGGGCTT ATCCGCCCCC TAAAGCAACC CAACTACATA ACCCGAAACA AGGGTTTTAT
ATTAAAGGTT GGGCACAAGA TGCTAAAGCG GTGATGGCTA ATGCCAAGGT GTGCTTAGCC
CCCTTAAGGT TTGGCGCTGG CATCAAGGGC AAATTGGCAG AAGCGATGCT GTGTAATACG
CCCAGCGTAA CCACATCCAT CGGGGCTGAA GGTATGTGTG ATGAAGCACT ATGGCCAGGT
GCCATTGCTA ATATCGCGGA ACAGTTCGCG CAAAACGCAG TGGCTTTGTA TCAAGACGAA
GGGCTATGGC TAAGGTGCCA ACAGCACATT GAACAGGCAC TACTTCGGTT CGATAAACGC
ACCATTGGGC CGGCTTTGAT TTCGCGTATT ATTGAAACCA AGTGCACGTT ATCAGCACAT
AGGTTGAAGA ACTTCACTGG TAGCATGTTG CAACACCATC ACCATAAAAG TACCCAATAT
ATGGCCCAAT GGATTGAAGC CAAAAATCGT TCAATTGATA ATTCAGAGGG CGATAAATAA
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| Protein sequence | MSIQHILVIG YVWPEPNSSA AGQHMMSLLT LFMQQGWSVS FASPAVQGEH KINLTEFGIS
EHSIALNCSS FDDFILNQAP DVVVFDRFML EEQFGWRVAK HCPNALRVLD TEDMHSLRDA
RHRAFKQGRD ITESDLKSDL ALREIASIYR CDLSLIISSF EYTLLQNTFC VPANLLYHCP
FMLDIEDITQ RYPNLSFSQR QHFVSIGNFR HEPNWNAVLW LKSEIWPLIR QALPTAELHI
YGAYPPPKAT QLHNPKQGFY IKGWAQDAKA VMANAKVCLA PLRFGAGIKG KLAEAMLCNT
PSVTTSIGAE GMCDEALWPG AIANIAEQFA QNAVALYQDE GLWLRCQQHI EQALLRFDKR
TIGPALISRI IETKCTLSAH RLKNFTGSML QHHHHKSTQY MAQWIEAKNR SIDNSEGDK
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