| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_1724 |
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| Symbol | |
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| ID | 4171933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2061402 |
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| End bp | 2062829 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638054734 |
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| Product | hypothetical protein |
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| Protein accession | YP_661299 |
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| Protein GI | 109898044 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0634806 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAAATA TGTTTAGTTT TGTTAACACC AAAAACCAAT CTACCACAGC GCGAAAGCCA
AAGCTTGGCA TGACACTGCT CGCCTTAAGC TGCACGTTAG GCCTGCATAA TACCGCGCAC
GCTAATGACT GGTGGTTTGA TGTTGAAGTG ATTGTGTTTA AGCGAGATAT TGCGGCACAA
AGTATCGCTG AAAGCTTTGC CCATAAAGCA CCAGAGTTTG CATCGCCAAC CGCATTCGAT
TTACTCAGTG ATTATATTAC GCCGGATCTG ACCTACATGA GTGCTGGCTT ACCTTCGTGT
GATGCCAGTG TTGAAGTAAA TCAAAAAGAA CAACATGAGC GCCAATTCAT CTTAGCAAAC
ACGGTATTTA CAGAAACGGA TTATTCTTAT CTTGATGTAC AAGATGAGCC GGCAGCAGAC
GAAACCACGG CCTTGATTGA TCAGCTACGG GGCGCGCAAA GCAGCTCGGT AGCAAATAAC
CCAACAAGCA CCATTGATAC CCGGGTCTAC ACTGGTAGCG ATAATGTCAG TCAAAGCGGC
GCACAAGTTA CGCCTAGCAC GAGTCCTACT CTATCGGAGC CAACTTGGGT TAAATGGCAA
ATTCCTCAAT CGCTGCCTTG CGCGTTCGAA CAAGACCGCG TGTTACTGGC AGGCCCTTAT
GACAAGCCTA TTGATGTCAG TCAACCTGAG CGAATACCCC GCAATATTGA TGGCGTGGAA
TGGCCTAATC GCCAAAGCCC ATACCTGTTG CCTAAATCTG CTCAACAGCT AGAAAAACTT
GAAGAACATA TCCGCTGGCA AAAAGATCTC ACCCCGATTT TGCATTTAAC ATGGCGCCAG
CCTGTGGTAT TTGGCAAAGA CAACGCCCAG CCGTTTAGAT TAATTGCCGG TGAAAATTAC
GCGCAAGCGT ATGACCAAGA TGGTCAACGC AAAGTTGAAT CACCACAAGT TGAACCAACA
GACCCGCGCT TTTCAGCACT AGAAGATGAT GACGCTAGCA GTGAACAGGG GTTATCTAAT
CAGGCCTTAT TCGCGCAAAT CAATGCTGCG CTCGCTTCGC CAGAGCCTGC AAAGGTCATT
GATTTTAGTC AGGGCACTCC TGCTGACGCC AGCATCGACG CAGAAGATTT CATTCAAGTC
GCAGAGAAAC CGCTTTGGCA GTTAGAGGGT GACTTTAAGG TGTACCTAGA AAATTTGGGT
CGCACGCCCT ACTTGCACAT TGACAGCAAT CTAGACTATC GAGCGCCTAT TACCCTGCGC
TTACCCGGTG ATACCGATGT GCAACCGAAT AACTTTTTAC AAAGCTTTCA CTTTGATCAG
TTACGTAGAG TGATTTCTAA ACAGTTACAC TATTTTGATC ACCCTTTATT CGGCATGGTG
GTGCAAATAC GCCGTTATGA GCCACCAAAA GAAACTGACA TTGATTAA
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| Protein sequence | MPNMFSFVNT KNQSTTARKP KLGMTLLALS CTLGLHNTAH ANDWWFDVEV IVFKRDIAAQ
SIAESFAHKA PEFASPTAFD LLSDYITPDL TYMSAGLPSC DASVEVNQKE QHERQFILAN
TVFTETDYSY LDVQDEPAAD ETTALIDQLR GAQSSSVANN PTSTIDTRVY TGSDNVSQSG
AQVTPSTSPT LSEPTWVKWQ IPQSLPCAFE QDRVLLAGPY DKPIDVSQPE RIPRNIDGVE
WPNRQSPYLL PKSAQQLEKL EEHIRWQKDL TPILHLTWRQ PVVFGKDNAQ PFRLIAGENY
AQAYDQDGQR KVESPQVEPT DPRFSALEDD DASSEQGLSN QALFAQINAA LASPEPAKVI
DFSQGTPADA SIDAEDFIQV AEKPLWQLEG DFKVYLENLG RTPYLHIDSN LDYRAPITLR
LPGDTDVQPN NFLQSFHFDQ LRRVISKQLH YFDHPLFGMV VQIRRYEPPK ETDID
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