Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1714 |
Symbol | |
ID | 4171923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 2048421 |
End bp | 2050094 |
Gene Length | 1674 bp |
Protein Length | 557 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638054724 |
Product | DNA repair protein RecN |
Protein accession | YP_661289 |
Protein GI | 109898034 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0497] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00634] DNA repair protein RecN |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACTTC ATCTCTCAAT TCGAAATTTT GCTGTGGTTA AATCTCTGGA CATCGATTTA TCCCAAGGTA TGACAGCGGT CACAGGTGAA ACTGGCGCTG GTAAGTCCAT TTCAGTGGAT GCATTAGGGT TGTGTTTAGG CGATAGGGCC GAAGCGGGTT TCGTGCGCAG CGGTGCTGAC AAGGCCGAAA TCTGTGCATC TTTTGATGTG AGTAAATTGT CACTTGCTGC AAAATGGTTA AAAGAGCACG AATTAGACGA TGGAAATGAT TGCTTAATCA GACGAGTCAT CTCTAGCGAA GGCCGCTCGA AAGCCTTCGT GAATGGCACA CCTGTACCCT TAGGCCAGCT GAAATGTTTA GGACAATACT TGTTAAGTAT TCATGGTCAG CATGCCCACC AACAGATTCT AAAAGCCGAT ACACAGCGCG AATTGCTGGA CAACTTTGCC GAGCACCCTT CTCTTTTAAA TAATGTGGCC CAGCACTACC AAAGCCTTCA ACATAAACAG AAAATCTATC GTGAGTTATT GGCGGGTCAG CAACAGCGTG CGGATCGTTT TCAGCTTTTG TCGTATCAAG TCTCTGAGTT AGATGAATTT GCCATCGGCG AGGGTGAGTT TTCTGAACTG GAAAGTGAGC ATAAAAGACT CAGTAATAGT CAAGCCTTGC TGGAGCAGAC TCAGTTGAGT TTTTATCAAC TATATGAAGC CGATGACTTT AATGCCCTAT CTGCGGTGCA AAATAGTATT GATAGATTGA CGGAATTGCA GGATCACGAC CCGACCCTTT CTCCGATTTT AGCATTGTTA AATGAAGCGA GTATTCAAAT TGATGAAGCT GCTCAAGAGC TTAGAGATTA CACTGATCAG CTAGAAATAG ACCCAATGAA AATGCAGCAG GTCGAAGCGC GATACTCTCA AGCGTTAGAT TTAGCCAGAA AGCATCACGT TAAAGCGGAA GAGTTATATA CCTACCACCA AACATTGACC CAAGAATTGT CTCAGCTTTC TGAAGATGAC CAAATGTTGG ATAGCATGCA GGACGAACTC TCAGCTCTAG AGAAGCTTTA TTTCAAAAGC TGCGAACAAC TTAGCTTGTC GCGTACTAAA GCCGCAAGCA AATTAGCCAA GCAGGTGGAA AGCCAGATTC ACAAAATGAA TATGGGCGAC ACGATATTTA AAATTGAAGT TGAGCCGCAG GTCAGTGCCT CTCCTAGCAA GCATGGTTTG GACAATATTC AATTCAAAGT GTCGACCAAT AAAGGACAAG CCCTTGATAA AATTGAAAAG GTTGTCTCTG GTGGCGAGTT GTCGCGGATT GGTCTTGCAA TTCAAGTGAT CAGCTCTCAT AACAGTCAGG TAGCAACCAT GATTTTTGAC GAAGTTGATA CCGGTATTAG TGGTTCCACC GCTTCAGTGG TGGGGCATTT ACTGCGTAAA TTAGGTGAAA CCTGTCAGGT AATTTGCGTA ACGCATTTAC CCCAAGTGGC AGCACGCGCG CACAACCAAA TGTTCGTTAC CAAGTTCAGT GACAAGAAAA CCACAGAAAC TCATATGATT TCTTTACAAG AAAATGAACG AATTGAAGAG TTGGCACGTC TACTAGCTGG AGACAAATTG ACGGATTCTG CCCTCGCCAA CGCCAAAGAG TTACTACAAA TCAGTAATTC TTAA
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Protein sequence | MLLHLSIRNF AVVKSLDIDL SQGMTAVTGE TGAGKSISVD ALGLCLGDRA EAGFVRSGAD KAEICASFDV SKLSLAAKWL KEHELDDGND CLIRRVISSE GRSKAFVNGT PVPLGQLKCL GQYLLSIHGQ HAHQQILKAD TQRELLDNFA EHPSLLNNVA QHYQSLQHKQ KIYRELLAGQ QQRADRFQLL SYQVSELDEF AIGEGEFSEL ESEHKRLSNS QALLEQTQLS FYQLYEADDF NALSAVQNSI DRLTELQDHD PTLSPILALL NEASIQIDEA AQELRDYTDQ LEIDPMKMQQ VEARYSQALD LARKHHVKAE ELYTYHQTLT QELSQLSEDD QMLDSMQDEL SALEKLYFKS CEQLSLSRTK AASKLAKQVE SQIHKMNMGD TIFKIEVEPQ VSASPSKHGL DNIQFKVSTN KGQALDKIEK VVSGGELSRI GLAIQVISSH NSQVATMIFD EVDTGISGST ASVVGHLLRK LGETCQVICV THLPQVAARA HNQMFVTKFS DKKTTETHMI SLQENERIEE LARLLAGDKL TDSALANAKE LLQISNS
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