Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_1706 |
Symbol | |
ID | 4171915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2040339 |
End bp | 2040830 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638054716 |
Product | protein tyrosine phosphatase |
Protein accession | YP_661281 |
Protein GI | 109898026 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTTGACA AAAAAGTAAA AAAAACTATC ACATCAGTCC TTTTCGTATG TTTGGGCAAT ATTTGTCGCT CGCCTACGGC GGAAGCGATA TTTCGCCATA AAGCACTACA TGCGGGCATG AGTATTGAAA TAGATTCCGC CGGTACGCTT GGGGCACATA TAGGTTCGCC ACCGGACAAG CGTTCACGGG CTGTGGGCGA AGAGAGGGGC TATAGTTTTA AGAAAATAAA ATGCCGTAAG GTAGACCCAA GTGATTTTGA ACACTTCGAT TACATTGTCG CCATGGACAA ACAGAATCTA CGAAACTTAC TAGAAATATG CCCAGAGGAA CATCAACACA AGATTGCTCT TATGATGAGT TTTTGTTCCT CACAAGAAGA TGAAGTGCCG GACCCCTACT ACGGGGGCAA GCGCGGGTTT GAATACGTAT TGGATTTAAT TGAACAGGCA TCGGATGGCC TGCTTGAACA GATCAAGCAG CGTTTTGCTT AA
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Protein sequence | MFDKKVKKTI TSVLFVCLGN ICRSPTAEAI FRHKALHAGM SIEIDSAGTL GAHIGSPPDK RSRAVGEERG YSFKKIKCRK VDPSDFEHFD YIVAMDKQNL RNLLEICPEE HQHKIALMMS FCSSQEDEVP DPYYGGKRGF EYVLDLIEQA SDGLLEQIKQ RFA
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