Gene Patl_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_1690 
Symbol 
ID4172281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2022245 
End bp2022691 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID638054699 
ProductMaoC-like dehydratase 
Protein accessionYP_661265 
Protein GI109898010 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAGG GTTTATTACA AATTGAAGTC GGTGAAGAGT TAGCGCCAAG CGCTTGGTTA 
AAAATAGATC AAGCGCGAAT AAACTTATTC GCTGATGCCA CAGGTGACCA TCAATGGATA
CATATTGATC CTAAGCGCTG TGAAAAAGAA AGTCCGTTTA AAACTACTAT TGCCCACGGT
TATTTGAGTG TGACACTCAT GCCTGAGTCC TTCTACCACA TGGTTCAGCT CGATTCTGCC
AGCCAAACTG TATTGAACTA CGGGATAGAT AAAATACGCT TTTTAGAGCC AGTGCGTGTC
AACGATGAGA TTCGCTTTGT CTCTTCTCTT GCGAGGAAAG AAAAGAAGCC GTTAGGCACT
TTATTTAGCT TTGACACCCA GATAGAAATT AAAGGCAGAG ACAAGCCCGC AGCAGTAGGC
ACTTTTTTAA TGATGTTACT GGCTTAA
 
Protein sequence
MAKGLLQIEV GEELAPSAWL KIDQARINLF ADATGDHQWI HIDPKRCEKE SPFKTTIAHG 
YLSVTLMPES FYHMVQLDSA SQTVLNYGID KIRFLEPVRV NDEIRFVSSL ARKEKKPLGT
LFSFDTQIEI KGRDKPAAVG TFLMMLLA